Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.71□□□□□ -1.82
CASC4Q6P4E1 AL354798.1-201ENST00000622505 329 ntBASIC3.71□□□□□ -1.82
CASC4Q6P4E1 AC048347.1-201ENST00000624621 427 ntBASIC3.71□□□□□ -1.82
CASC4Q6P4E1 RNA5SP196-201ENST00000625967 102 ntBASIC3.71□□□□□ -1.82
CASC4Q6P4E1 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CASC4Q6P4E1 CYP3A51P-201ENST00000633513 256 ntBASIC3.71□□□□□ -1.82
CASC4Q6P4E1 AP000553.6-201ENST00000641242 118 ntBASIC3.71□□□□□ -1.82
CASC4Q6P4E1 AL732372.2-225ENST00000642124 456 ntBASIC3.71□□□□□ -1.82
CASC4Q6P4E1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CASC4Q6P4E1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.71□□□□□ -1.82
CASC4Q6P4E1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CASC4Q6P4E1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.71□□□□□ -1.82
CASC4Q6P4E1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.71□□□□□ -1.82
CASC4Q6P4E1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 RNU6-413P-201ENST00000384115 107 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 MIR607-201ENST00000385241 96 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 RPL31P1-201ENST00000398116 372 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AL356320.2-201ENST00000417263 507 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC006989.1-201ENST00000427212 131 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 USP9YP31-201ENST00000431405 881 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 CYCSP43-201ENST00000438233 310 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 ZNF886P-201ENST00000450781 723 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 NUTF2P7-201ENST00000453086 375 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 RPL5P24-201ENST00000463742 885 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC103987.1-201ENST00000473394 348 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 VN1R105P-201ENST00000486595 910 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 RPS3AP50-201ENST00000487064 803 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC093267.1-201ENST00000489176 961 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC134050.1-201ENST00000495088 933 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 RPL23AP55-201ENST00000498163 452 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 HMGB1P22-201ENST00000505315 124 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC114322.1-201ENST00000506771 926 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC008837.2-201ENST00000513076 418 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 RN7SKP157-201ENST00000516174 282 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC023161.2-201ENST00000551218 780 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AADACP1-206ENST00000561502 1193 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC087499.8-201ENST00000578406 226 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC053481.4-201ENST00000583164 216 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC021749.1-201ENST00000604322 607 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC090772.4-201ENST00000623599 362 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 AC007656.2-201ENST00000624902 4547 ntBASIC3.7□□□□□ -1.82
CASC4Q6P4E1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CASC4Q6P4E1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 PWAR6-201ENST00000552334 4618 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 SNRPEP3-201ENST00000338402 276 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 NACA3P-201ENST00000359690 648 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 RNA5SP235-201ENST00000365411 114 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 PTMAP5-201ENST00000393073 333 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 SNRPEP2-201ENST00000397592 279 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 AL139247.1-201ENST00000422768 325 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 HSFY1P1-201ENST00000423928 1178 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 NANOGP5-201ENST00000424456 877 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 AC092648.1-201ENST00000425870 423 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 ARF4P2-201ENST00000430209 526 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 RPL21P112-201ENST00000434403 463 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.69□□□□□ -1.82
CASC4Q6P4E1 RPS29P31-201ENST00000446147 164 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 PTGES3P5-201ENST00000455109 434 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 UBDP1-202ENST00000457888 382 ntBASIC3.69□□□□□ -1.82
CASC4Q6P4E1 RPL7L1P8-201ENST00000469911 741 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms