Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.06□□□□□ -1.76
PTCH1Q13635 PWAR6-201ENST00000552334 4618 ntBASIC4.06□□□□□ -1.76
PTCH1Q13635 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.05□□□□□ -1.76
PTCH1Q13635 METTL21EP-201ENST00000298105 713 ntBASIC4.05□□□□□ -1.76
PTCH1Q13635 RNU6-883P-201ENST00000384597 107 ntBASIC4.05□□□□□ -1.76
PTCH1Q13635 HMGB1P10-201ENST00000395823 563 ntBASIC4.05□□□□□ -1.76
PTCH1Q13635 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.05□□□□□ -1.76
PTCH1Q13635 AL592148.1-201ENST00000413568 445 ntBASIC4.05□□□□□ -1.76
PTCH1Q13635 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.05□□□□□ -1.76
PTCH1Q13635 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.05□□□□□ -1.76
PTCH1Q13635 RPL31P13-201ENST00000484151 370 ntBASIC4.05□□□□□ -1.76
PTCH1Q13635 AC093663.2-201ENST00000484625 313 ntBASIC4.05□□□□□ -1.76
PTCH1Q13635 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.05□□□□□ -1.76
PTCH1Q13635 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.05□□□□□ -1.76
PTCH1Q13635 RNA5SP24-201ENST00000516478 95 ntBASIC4.05□□□□□ -1.76
PTCH1Q13635 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.05□□□□□ -1.76
PTCH1Q13635 AP000919.1-202ENST00000581139 1264 ntBASIC4.05□□□□□ -1.76
PTCH1Q13635 AP001180.3-201ENST00000582221 145 ntBASIC4.05□□□□□ -1.76
PTCH1Q13635 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.05□□□□□ -1.76
PTCH1Q13635 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTCH1Q13635 ELL2P4-201ENST00000446870 1376 ntBASIC4.05□□□□□ -1.76
PTCH1Q13635 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.05□□□□□ -1.76
PTCH1Q13635 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCH1Q13635 RNU6-98P-201ENST00000384173 107 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 TAF9BP2-201ENST00000400856 499 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 RNA5SP239-201ENST00000410218 129 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 RNU2-17P-201ENST00000410290 190 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCH1Q13635 LINC01347-201ENST00000417964 355 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 CR848007.2-201ENST00000424918 787 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 DUTP6-201ENST00000425573 462 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 RN7SL442P-201ENST00000473804 320 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 OR5H3P-201ENST00000502817 919 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCH1Q13635 SCGB1D5P-201ENST00000515134 247 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCH1Q13635 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.04□□□□□ -1.76
PTCH1Q13635 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCH1Q13635 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCH1Q13635 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PTCH1Q13635 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCH1Q13635 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PTCH1Q13635 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCH1Q13635 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCH1Q13635 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTCH1Q13635 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCH1Q13635 RNA5SP21-201ENST00000410917 96 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 AC004987.3-201ENST00000413879 771 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 XKRYP4-201ENST00000414395 483 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 MTND4P24-201ENST00000424002 397 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.04□□□□□ -1.76
PTCH1Q13635 FTH1P6-201ENST00000430768 320 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.04□□□□□ -1.76
PTCH1Q13635 XKRYP5-201ENST00000449659 483 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCH1Q13635 AC096992.1-201ENST00000459808 709 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCH1Q13635 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCH1Q13635 AC234778.2-201ENST00000566241 354 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.04□□□□□ -1.76
PTCH1Q13635 AP003117.2-201ENST00000606010 545 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 AL355802.4-201ENST00000607635 548 ntBASIC4.04□□□□□ -1.76
PTCH1Q13635 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PTCH1Q13635 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTCH1Q13635 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.04□□□□□ -1.76
PTCH1Q13635 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.04□□□□□ -1.76
PTCH1Q13635 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.03□□□□□ -1.76
PTCH1Q13635 AL133412.1-201ENST00000380194 2992 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCH1Q13635 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCH1Q13635 RNA5SP391-201ENST00000363456 119 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 SNORD51.1-201ENST00000365405 77 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.03□□□□□ -1.76
PTCH1Q13635 MIR1303-201ENST00000408625 86 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 RNA5SP107-201ENST00000411358 122 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 RPL31P45-201ENST00000419532 356 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 SRIP2-201ENST00000428470 166 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.03□□□□□ -1.76
PTCH1Q13635 ARL5AP4-201ENST00000430731 512 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTCH1Q13635 MTND5P8-201ENST00000449817 1083 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.03□□□□□ -1.76
PTCH1Q13635 AC008549.1-201ENST00000512900 643 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.03□□□□□ -1.76
PTCH1Q13635 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.03□□□□□ -1.76
PTCH1Q13635 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTCH1Q13635 AC079610.2-201ENST00000604818 690 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 AC022509.4-201ENST00000621404 572 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 AC064859.1-201ENST00000624741 174 ntBASIC4.03□□□□□ -1.76
PTCH1Q13635 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTCH1Q13635 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCH1Q13635 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.02□□□□□ -1.77
PTCH1Q13635 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
PTCH1Q13635 OR11H5P-202ENST00000641612 1325 ntBASIC4.02□□□□□ -1.77
PTCH1Q13635 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCH1Q13635 MTATP6P31-201ENST00000406985 692 ntBASIC4.02□□□□□ -1.77
PTCH1Q13635 RNU2-52P-201ENST00000410680 190 ntBASIC4.02□□□□□ -1.77
PTCH1Q13635 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.02□□□□□ -1.77
PTCH1Q13635 AC010468.1-201ENST00000461022 817 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms