Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LSM3P2-201ENST00000551246 273 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 FKBP1BP1-201ENST00000553366 325 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.32□□□□□ -1.72
SUMO3P55854 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.32□□□□□ -1.72
SUMO3P55854 AC093249.4-201ENST00000564755 259 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 AC091042.1-201ENST00000579213 173 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.32□□□□□ -1.72
SUMO3P55854 MIR4472-2-201ENST00000582069 67 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.32□□□□□ -1.72
SUMO3P55854 AC006254.3-201ENST00000603353 884 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 AL031320.1-201ENST00000604177 357 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 AC090948.1-201ENST00000607464 549 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SUMO3P55854 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.32□□□□□ -1.72
SUMO3P55854 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SUMO3P55854 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SUMO3P55854 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SUMO3P55854 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.32□□□□□ -1.72
SUMO3P55854 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SUMO3P55854 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SUMO3P55854 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
SUMO3P55854 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SUMO3P55854 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.31□□□□□ -1.72
SUMO3P55854 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SUMO3P55854 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SUMO3P55854 RNU6-517P-201ENST00000384362 110 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.31□□□□□ -1.72
SUMO3P55854 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.31□□□□□ -1.72
SUMO3P55854 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.31□□□□□ -1.72
SUMO3P55854 BX295541.1-201ENST00000417774 250 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 PIGFP2-201ENST00000421400 651 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AC244098.2-201ENST00000422068 99 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.31□□□□□ -1.72
SUMO3P55854 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.31□□□□□ -1.72
SUMO3P55854 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.31□□□□□ -1.72
SUMO3P55854 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.31□□□□□ -1.72
SUMO3P55854 ARPC3P1-201ENST00000437218 533 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 CBX1P1-201ENST00000440184 427 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.31□□□□□ -1.72
SUMO3P55854 RAC1P7-201ENST00000445367 377 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 RPS17P13-201ENST00000448974 407 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.31□□□□□ -1.72
SUMO3P55854 AL162388.1-201ENST00000450912 352 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.31□□□□□ -1.72
SUMO3P55854 AC092324.1-201ENST00000468671 324 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 RPS3AP17-201ENST00000472594 777 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.31□□□□□ -1.72
SUMO3P55854 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.31□□□□□ -1.72
SUMO3P55854 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.31□□□□□ -1.72
SUMO3P55854 NDUFA5P12-201ENST00000503796 343 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 RNU6-513P-201ENST00000516104 104 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.31□□□□□ -1.72
SUMO3P55854 AC016957.1-201ENST00000534895 309 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.31□□□□□ -1.72
SUMO3P55854 AP001880.2-201ENST00000538233 448 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.31□□□□□ -1.72
SUMO3P55854 AL110118.1-201ENST00000553543 400 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AC087477.6-201ENST00000559595 843 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 UBE2FP2-201ENST00000566646 462 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AL391840.1-201ENST00000571144 367 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AC099489.2-201ENST00000574976 260 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 MIR3146-201ENST00000580367 79 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.31□□□□□ -1.72
SUMO3P55854 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.31□□□□□ -1.72
SUMO3P55854 AC012669.1-201ENST00000603209 283 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AC245014.2-201ENST00000603689 287 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AC246785.4-201ENST00000605374 287 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 HMGN2P28-201ENST00000606102 262 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.31□□□□□ -1.72
SUMO3P55854 AC108747.1-201ENST00000609508 535 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 TUG1_1.1-201ENST00000610654 145 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SUMO3P55854 AC136475.10-201ENST00000620253 385 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AC009268.2-201ENST00000621925 457 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AC091953.2-201ENST00000623979 160 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.31□□□□□ -1.72
SUMO3P55854 OR5AK4P-201ENST00000635912 903 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AC068137.3-201ENST00000639191 341 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 AC073869.6-201ENST00000640656 341 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.31□□□□□ -1.72
SUMO3P55854 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SUMO3P55854 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SUMO3P55854 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SUMO3P55854 AL138713.1-201ENST00000624026 2130 ntBASIC4.31□□□□□ -1.72
SUMO3P55854 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SUMO3P55854 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.31□□□□□ -1.72
SUMO3P55854 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SUMO3P55854 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SUMO3P55854 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SUMO3P55854 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SUMO3P55854 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.3□□□□□ -1.72
SUMO3P55854 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SUMO3P55854 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.3□□□□□ -1.72
SUMO3P55854 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SUMO3P55854 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
SUMO3P55854 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.3□□□□□ -1.72
SUMO3P55854 RN7SKP226-201ENST00000364912 300 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SUMO3P55854 RPL23AP32-201ENST00000395315 459 ntBASIC4.3□□□□□ -1.72
SUMO3P55854 Z98745.1-201ENST00000402553 494 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms