Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.54□□□□□ -1.84
SSR1P43307 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.54□□□□□ -1.84
SSR1P43307 AL356274.2-201ENST00000624379 3752 ntBASIC3.54□□□□□ -1.84
SSR1P43307 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSR1P43307 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.53□□□□□ -1.84
SSR1P43307 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.53□□□□□ -1.84
SSR1P43307 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSR1P43307 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSR1P43307 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSR1P43307 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.53□□□□□ -1.84
SSR1P43307 RPS29P4-201ENST00000414733 161 ntBASIC3.53□□□□□ -1.84
SSR1P43307 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.53□□□□□ -1.84
SSR1P43307 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.53□□□□□ -1.84
SSR1P43307 NIPA2P1-201ENST00000426223 976 ntBASIC3.53□□□□□ -1.84
SSR1P43307 AC018644.1-201ENST00000429934 551 ntBASIC3.53□□□□□ -1.84
SSR1P43307 ETF1P3-201ENST00000430422 1160 ntBASIC3.53□□□□□ -1.84
SSR1P43307 ATP5JP1-201ENST00000431631 322 ntBASIC3.53□□□□□ -1.84
SSR1P43307 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSR1P43307 UBBP3-201ENST00000445497 241 ntBASIC3.53□□□□□ -1.84
SSR1P43307 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.53□□□□□ -1.84
SSR1P43307 RPL23AP20-201ENST00000447965 421 ntBASIC3.53□□□□□ -1.84
SSR1P43307 RPL7P15-201ENST00000461190 712 ntBASIC3.53□□□□□ -1.84
SSR1P43307 AC010301.1-201ENST00000473936 355 ntBASIC3.53□□□□□ -1.84
SSR1P43307 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.53□□□□□ -1.84
SSR1P43307 RPL21P131-201ENST00000497298 483 ntBASIC3.53□□□□□ -1.84
SSR1P43307 AC112198.1-201ENST00000505369 1220 ntBASIC3.53□□□□□ -1.84
SSR1P43307 FCF1P8-201ENST00000510322 597 ntBASIC3.53□□□□□ -1.84
SSR1P43307 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.53□□□□□ -1.84
SSR1P43307 SNORA76.2-201ENST00000517095 137 ntBASIC3.53□□□□□ -1.84
SSR1P43307 PAICSP4-201ENST00000517543 1253 ntBASIC3.53□□□□□ -1.84
SSR1P43307 AC245166.1-201ENST00000521012 253 ntBASIC3.53□□□□□ -1.84
SSR1P43307 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.53□□□□□ -1.84
SSR1P43307 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.53□□□□□ -1.84
SSR1P43307 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.53□□□□□ -1.84
SSR1P43307 SNRPGP1-201ENST00000553864 222 ntBASIC3.53□□□□□ -1.84
SSR1P43307 ATP5F1P7-201ENST00000567330 760 ntBASIC3.53□□□□□ -1.84
SSR1P43307 RN7SL622P-201ENST00000585292 275 ntBASIC3.53□□□□□ -1.84
SSR1P43307 AP001029.3-201ENST00000588063 596 ntBASIC3.53□□□□□ -1.84
SSR1P43307 AL020997.3-201ENST00000602843 359 ntBASIC3.53□□□□□ -1.84
SSR1P43307 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSR1P43307 AC243312.2-201ENST00000623340 601 ntBASIC3.53□□□□□ -1.84
SSR1P43307 ZNF37BP-203ENST00000452306 1352 ntBASIC3.52□□□□□ -1.85
SSR1P43307 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SSR1P43307 MFSD8-213ENST00000641134 1327 ntBASIC3.52□□□□□ -1.85
SSR1P43307 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SSR1P43307 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.52□□□□□ -1.85
SSR1P43307 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SSR1P43307 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSR1P43307 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSR1P43307 RNU6-374P-201ENST00000364146 108 ntBASIC3.52□□□□□ -1.85
SSR1P43307 RNU6-1027P-201ENST00000383998 107 ntBASIC3.52□□□□□ -1.85
SSR1P43307 SNORD17-201ENST00000390930 237 ntBASIC3.52□□□□□ -1.85
SSR1P43307 MIR1250-201ENST00000408098 113 ntBASIC3.52□□□□□ -1.85
SSR1P43307 RNA5SP44-201ENST00000410446 133 ntBASIC3.52□□□□□ -1.85
SSR1P43307 RNA5SP31-201ENST00000411144 127 ntBASIC3.52□□□□□ -1.85
SSR1P43307 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.52□□□□□ -1.85
SSR1P43307 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.52□□□□□ -1.85
SSR1P43307 AC093578.1-201ENST00000415219 368 ntBASIC3.52□□□□□ -1.85
SSR1P43307 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.52□□□□□ -1.85
SSR1P43307 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.52□□□□□ -1.85
SSR1P43307 RPL6P5-201ENST00000445678 828 ntBASIC3.52□□□□□ -1.85
SSR1P43307 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.52□□□□□ -1.85
SSR1P43307 RPL21P23-201ENST00000446654 460 ntBASIC3.52□□□□□ -1.85
SSR1P43307 RPL26P28-201ENST00000451325 435 ntBASIC3.52□□□□□ -1.85
SSR1P43307 RPS23P3-201ENST00000470993 430 ntBASIC3.52□□□□□ -1.85
SSR1P43307 SYPL1P1-201ENST00000473622 768 ntBASIC3.52□□□□□ -1.85
SSR1P43307 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SSR1P43307 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.52□□□□□ -1.85
SSR1P43307 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.52□□□□□ -1.85
SSR1P43307 AC025768.1-201ENST00000510057 267 ntBASIC3.52□□□□□ -1.85
SSR1P43307 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.52□□□□□ -1.85
SSR1P43307 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.52□□□□□ -1.85
SSR1P43307 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SSR1P43307 OR5B10P-201ENST00000532869 642 ntBASIC3.52□□□□□ -1.85
SSR1P43307 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.52□□□□□ -1.85
SSR1P43307 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.52□□□□□ -1.85
SSR1P43307 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSR1P43307 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.52□□□□□ -1.85
SSR1P43307 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.52□□□□□ -1.85
SSR1P43307 AC090695.1-201ENST00000561269 1222 ntBASIC3.52□□□□□ -1.85
SSR1P43307 AC104229.1-201ENST00000561364 255 ntBASIC3.52□□□□□ -1.85
SSR1P43307 LINC00557-201ENST00000563184 1279 ntBASIC3.52□□□□□ -1.85
SSR1P43307 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.52□□□□□ -1.85
SSR1P43307 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.52□□□□□ -1.85
SSR1P43307 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.52□□□□□ -1.85
SSR1P43307 AC092608.3-201ENST00000625017 386 ntBASIC3.52□□□□□ -1.85
SSR1P43307 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSR1P43307 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.52□□□□□ -1.85
SSR1P43307 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.52□□□□□ -1.85
SSR1P43307 SEC63P2-201ENST00000503863 1939 ntBASIC3.52□□□□□ -1.85
SSR1P43307 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSR1P43307 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.51□□□□□ -1.85
SSR1P43307 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSR1P43307 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.51□□□□□ -1.85
SSR1P43307 SNORD56.5-201ENST00000364281 72 ntBASIC3.51□□□□□ -1.85
SSR1P43307 RNU1-109P-201ENST00000383960 147 ntBASIC3.51□□□□□ -1.85
SSR1P43307 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSR1P43307 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.51□□□□□ -1.85
SSR1P43307 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.51□□□□□ -1.85
SSR1P43307 RN7SKP220-201ENST00000410611 288 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms