Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNY1P12-201ENST00000364251 105 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL6A2P12110 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL6A2P12110 RPL7P60-201ENST00000397636 735 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 SNORA77-201ENST00000408716 125 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 RSU1P3-201ENST00000412878 835 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.97□□□□□ -1.61
COL6A2P12110 RPL31P2-201ENST00000413849 377 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.97□□□□□ -1.61
COL6A2P12110 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 AC108075.1-201ENST00000424692 529 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC006548.1-201ENST00000427470 102 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AL121776.1-201ENST00000429337 372 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.97□□□□□ -1.61
COL6A2P12110 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.97□□□□□ -1.61
COL6A2P12110 AL606489.2-201ENST00000433886 234 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 MRPL48P1-201ENST00000445390 636 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.97□□□□□ -1.61
COL6A2P12110 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.97□□□□□ -1.61
COL6A2P12110 AL691482.1-201ENST00000453255 87 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.97□□□□□ -1.61
COL6A2P12110 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
COL6A2P12110 AC055855.1-201ENST00000489563 579 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
COL6A2P12110 AC020890.1-201ENST00000491837 504 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 SNORA40.12-201ENST00000516329 111 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AF186190.1-201ENST00000517470 480 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 HMGB1P19-201ENST00000517578 577 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.97□□□□□ -1.61
COL6A2P12110 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 PHBP17-201ENST00000528576 541 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.97□□□□□ -1.61
COL6A2P12110 AP000907.2-201ENST00000530827 353 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 AC092470.1-201ENST00000546187 132 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC090022.1-201ENST00000546569 311 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL6A2P12110 ARL2BPP2-201ENST00000550907 489 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.97□□□□□ -1.61
COL6A2P12110 AC007424.1-203ENST00000554613 687 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.97□□□□□ -1.61
COL6A2P12110 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
COL6A2P12110 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.97□□□□□ -1.61
COL6A2P12110 AC009117.1-201ENST00000563948 554 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC034105.3-201ENST00000565294 442 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.97□□□□□ -1.61
COL6A2P12110 HMGB1P6-201ENST00000569046 646 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.97□□□□□ -1.61
COL6A2P12110 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.97□□□□□ -1.61
COL6A2P12110 UBE2L4-201ENST00000587688 464 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC044792.1-201ENST00000593294 196 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC087783.2-201ENST00000605070 562 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AL136363.1-201ENST00000605349 337 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC007038.2-201ENST00000608095 740 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.97□□□□□ -1.61
COL6A2P12110 AL158801.5-201ENST00000623123 465 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 CR381572.1-201ENST00000625098 102 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL6A2P12110 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL6A2P12110 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.97□□□□□ -1.61
COL6A2P12110 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 LINC01109-201ENST00000603837 3081 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL6A2P12110 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL6A2P12110 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
COL6A2P12110 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL6A2P12110 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
COL6A2P12110 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
COL6A2P12110 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
COL6A2P12110 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
COL6A2P12110 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL6A2P12110 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL6A2P12110 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.96□□□□□ -1.62
COL6A2P12110 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.96□□□□□ -1.62
COL6A2P12110 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL6A2P12110 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.96□□□□□ -1.62
COL6A2P12110 Y_RNA.157-201ENST00000363638 102 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL6A2P12110 U3.20-201ENST00000390909 217 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 RNU6-1158P-201ENST00000391167 107 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 Z97832.1-201ENST00000402490 328 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AL807761.1-201ENST00000417622 171 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC069213.2-201ENST00000420238 366 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC137499.1-201ENST00000427602 88 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 GPR143P-201ENST00000434155 205 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 OR52B5P-201ENST00000435337 951 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.96□□□□□ -1.62
COL6A2P12110 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.96□□□□□ -1.62
COL6A2P12110 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.96□□□□□ -1.62
COL6A2P12110 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.96□□□□□ -1.62
COL6A2P12110 KNOP1P3-201ENST00000446933 426 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 AL354714.3-201ENST00000447284 493 ntBASIC4.96□□□□□ -1.62
COL6A2P12110 RPL7P52-201ENST00000449200 742 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms