Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RPL7P37-201ENST00000425095 738 ntBASIC1.14□□□□□ -2.23
USH2AO75445 UBE2V1P6-201ENST00000430840 422 ntBASIC1.14□□□□□ -2.23
USH2AO75445 RPS29P6-201ENST00000438196 145 ntBASIC1.14□□□□□ -2.23
USH2AO75445 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.14□□□□□ -2.23
USH2AO75445 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.14□□□□□ -2.23
USH2AO75445 AC007395.1-201ENST00000451333 677 ntBASIC1.14□□□□□ -2.23
USH2AO75445 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.14□□□□□ -2.23
USH2AO75445 AC096725.1-201ENST00000514266 313 ntBASIC1.14□□□□□ -2.23
USH2AO75445 SULT1C2P2-201ENST00000562517 294 ntBASIC1.14□□□□□ -2.23
USH2AO75445 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC1.14□□□□□ -2.23
USH2AO75445 AC110994.2-201ENST00000635481 492 ntBASIC1.14□□□□□ -2.23
USH2AO75445 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC1.14□□□□□ -2.23
USH2AO75445 AC005261.6-201ENST00000623072 1387 ntBASIC1.14□□□□□ -2.23
USH2AO75445 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 SNORA51.11-201ENST00000384442 131 ntBASIC1.14□□□□□ -2.23
USH2AO75445 AL359511.1-201ENST00000402970 211 ntBASIC1.14□□□□□ -2.23
USH2AO75445 RNA5SP146-201ENST00000410743 123 ntBASIC1.14□□□□□ -2.23
USH2AO75445 AL356320.1-201ENST00000429616 163 ntBASIC1.14□□□□□ -2.23
USH2AO75445 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.14□□□□□ -2.23
USH2AO75445 AL353705.4-201ENST00000449661 238 ntBASIC1.14□□□□□ -2.23
USH2AO75445 RNU4ATAC6P-201ENST00000516592 126 ntBASIC1.14□□□□□ -2.23
USH2AO75445 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.14□□□□□ -2.23
USH2AO75445 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC1.14□□□□□ -2.23
USH2AO75445 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.14□□□□□ -2.23
USH2AO75445 AL627230.5-201ENST00000619807 58 ntBASIC1.14□□□□□ -2.23
USH2AO75445 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
USH2AO75445 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC1.14□□□□□ -2.23
USH2AO75445 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.14□□□□□ -2.23
USH2AO75445 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 AC007064.1-201ENST00000412238 351 ntBASIC1.14□□□□□ -2.23
USH2AO75445 AC112220.1-201ENST00000434628 355 ntBASIC1.14□□□□□ -2.23
USH2AO75445 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC1.14□□□□□ -2.23
USH2AO75445 NPM1P49-201ENST00000448027 714 ntBASIC1.14□□□□□ -2.23
USH2AO75445 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC1.14□□□□□ -2.23
USH2AO75445 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC1.14□□□□□ -2.23
USH2AO75445 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC1.14□□□□□ -2.23
USH2AO75445 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 RPL21P5-201ENST00000554662 472 ntBASIC1.14□□□□□ -2.23
USH2AO75445 AC010928.3-201ENST00000587712 541 ntBASIC1.14□□□□□ -2.23
USH2AO75445 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
USH2AO75445 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.14□□□□□ -2.23
USH2AO75445 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC1.14□□□□□ -2.23
USH2AO75445 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
USH2AO75445 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC1.14□□□□□ -2.23
USH2AO75445 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
USH2AO75445 RNU1-108P-201ENST00000362556 161 ntBASIC1.13□□□□□ -2.23
USH2AO75445 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
USH2AO75445 RPL32P35-201ENST00000415214 394 ntBASIC1.13□□□□□ -2.23
USH2AO75445 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.13□□□□□ -2.23
USH2AO75445 AL163540.1-201ENST00000485382 386 ntBASIC1.13□□□□□ -2.23
USH2AO75445 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.13□□□□□ -2.23
USH2AO75445 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.13□□□□□ -2.23
USH2AO75445 VN1R80P-201ENST00000597126 338 ntBASIC1.13□□□□□ -2.23
USH2AO75445 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.13□□□□□ -2.23
USH2AO75445 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.13□□□□□ -2.23
USH2AO75445 MIR6504-201ENST00000613520 61 ntBASIC1.13□□□□□ -2.23
USH2AO75445 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.13□□□□□ -2.23
USH2AO75445 METTL8-218ENST00000638989 876 ntTSL 5 BASIC1.13□□□□□ -2.23
USH2AO75445 METTL8-219ENST00000640734 726 ntTSL 2 BASIC1.13□□□□□ -2.23
USH2AO75445 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
USH2AO75445 RNU1-73P-201ENST00000383971 164 ntBASIC1.13□□□□□ -2.23
USH2AO75445 AL591416.1-201ENST00000404015 867 ntBASIC1.13□□□□□ -2.23
USH2AO75445 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
USH2AO75445 AL590639.1-201ENST00000456484 337 ntBASIC1.13□□□□□ -2.23
USH2AO75445 AC105918.1-201ENST00000474399 838 ntBASIC1.13□□□□□ -2.23
USH2AO75445 RPL36AP51-201ENST00000487216 318 ntBASIC1.13□□□□□ -2.23
USH2AO75445 OR5AK3P-201ENST00000527486 1297 ntBASIC1.13□□□□□ -2.23
USH2AO75445 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.13□□□□□ -2.23
USH2AO75445 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC1.13□□□□□ -2.23
USH2AO75445 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.13□□□□□ -2.23
USH2AO75445 AC073476.4-201ENST00000628409 72 ntBASIC1.13□□□□□ -2.23
USH2AO75445 AC092593.1-201ENST00000515413 1815 ntBASIC1.13□□□□□ -2.23
USH2AO75445 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.13□□□□□ -2.23
USH2AO75445 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC1.13□□□□□ -2.23
USH2AO75445 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
USH2AO75445 MTCO1P4-201ENST00000520516 1409 ntBASIC1.13□□□□□ -2.23
USH2AO75445 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.13□□□□□ -2.23
USH2AO75445 MIR30E-201ENST00000362104 92 ntBASIC1.13□□□□□ -2.23
USH2AO75445 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
USH2AO75445 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC1.13□□□□□ -2.23
USH2AO75445 AL024509.2-201ENST00000493462 493 ntBASIC1.13□□□□□ -2.23
USH2AO75445 NIPA2P2-201ENST00000496376 1083 ntBASIC1.13□□□□□ -2.23
USH2AO75445 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.13□□□□□ -2.23
USH2AO75445 HSPE1P18-201ENST00000517602 280 ntBASIC1.13□□□□□ -2.23
USH2AO75445 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.13□□□□□ -2.23
USH2AO75445 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC1.13□□□□□ -2.23
USH2AO75445 RMST_8.1-201ENST00000610287 165 ntBASIC1.13□□□□□ -2.23
USH2AO75445 AC019080.5-201ENST00000624891 757 ntBASIC1.13□□□□□ -2.23
USH2AO75445 DDX10P1-201ENST00000448545 1933 ntBASIC1.13□□□□□ -2.23
USH2AO75445 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
USH2AO75445 RBBP8P1-201ENST00000449447 1844 ntBASIC1.13□□□□□ -2.23
USH2AO75445 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC1.13□□□□□ -2.23
USH2AO75445 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms