Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.93□□□□□ -1.62
OPHN1O60890 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.93□□□□□ -1.62
OPHN1O60890 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
OPHN1O60890 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
OPHN1O60890 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.92□□□□□ -1.62
OPHN1O60890 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.92□□□□□ -1.62
OPHN1O60890 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
OPHN1O60890 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
OPHN1O60890 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.92□□□□□ -1.62
OPHN1O60890 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.92□□□□□ -1.62
OPHN1O60890 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.92□□□□□ -1.62
OPHN1O60890 GNG5P1-201ENST00000255500 204 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
OPHN1O60890 OR4K15-201ENST00000305051 1216 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
OPHN1O60890 RNU4-44P-201ENST00000363050 141 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 RPS20P2-201ENST00000402520 389 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AL592291.1-201ENST00000403830 352 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 RNU6-195P-201ENST00000411352 109 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 RNU6-603P-201ENST00000411403 107 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.92□□□□□ -1.62
OPHN1O60890 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.92□□□□□ -1.62
OPHN1O60890 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.92□□□□□ -1.62
OPHN1O60890 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.92□□□□□ -1.62
OPHN1O60890 RPEP2-201ENST00000432149 701 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.92□□□□□ -1.62
OPHN1O60890 HMGB1P31-201ENST00000437242 427 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AL121601.2-201ENST00000438019 707 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AL512326.1-201ENST00000443050 721 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 NFU1P2-201ENST00000448700 469 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.92□□□□□ -1.62
OPHN1O60890 FTH1P24-201ENST00000503502 462 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.92□□□□□ -1.62
OPHN1O60890 SAP18P1-201ENST00000512058 390 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AC010493.1-201ENST00000513479 292 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.92□□□□□ -1.62
OPHN1O60890 RNU2-46P-201ENST00000517038 113 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.92□□□□□ -1.62
OPHN1O60890 AP001880.2-201ENST00000538233 448 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AC034268.2-201ENST00000571784 482 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 MIR4277-201ENST00000578298 84 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.92□□□□□ -1.62
OPHN1O60890 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.92□□□□□ -1.62
OPHN1O60890 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.92□□□□□ -1.62
OPHN1O60890 CKS1BP3-201ENST00000600888 237 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 DUXAP4-201ENST00000603046 613 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AP000907.4-201ENST00000604143 237 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AC025253.1-201ENST00000613623 543 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 MLECP1-201ENST00000615893 709 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AC006338.1-201ENST00000618453 749 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 AP001005.3-201ENST00000622049 129 ntBASIC4.92□□□□□ -1.62
OPHN1O60890 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
OPHN1O60890 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
OPHN1O60890 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
OPHN1O60890 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
OPHN1O60890 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
OPHN1O60890 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
OPHN1O60890 AC009229.4-201ENST00000623854 1947 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.91□□□□□ -1.62
OPHN1O60890 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.91□□□□□ -1.62
OPHN1O60890 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
OPHN1O60890 TLK1P1-201ENST00000456760 2440 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
OPHN1O60890 RNU6-744P-201ENST00000365557 107 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 RNU6-1316P-201ENST00000384242 108 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 CALM2P3-201ENST00000400429 449 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
OPHN1O60890 AC069218.2-201ENST00000411665 344 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 AC114755.2-201ENST00000413520 361 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 BX510359.2-201ENST00000417920 305 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.91□□□□□ -1.62
OPHN1O60890 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.91□□□□□ -1.62
OPHN1O60890 MTCO2P5-201ENST00000422621 426 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
OPHN1O60890 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.91□□□□□ -1.62
OPHN1O60890 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 HSPE1P28-201ENST00000443139 211 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 RPL17P49-201ENST00000443728 411 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 AC112653.1-201ENST00000443851 386 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.91□□□□□ -1.62
OPHN1O60890 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
OPHN1O60890 AC239809.1-201ENST00000450470 217 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.91□□□□□ -1.62
OPHN1O60890 AL445433.1-201ENST00000457507 257 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 AC034222.1-201ENST00000494052 532 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 AC019235.1-201ENST00000503847 207 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.91□□□□□ -1.62
OPHN1O60890 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
OPHN1O60890 OR5AQ1P-201ENST00000527596 927 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.91□□□□□ -1.62
OPHN1O60890 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.91□□□□□ -1.62
OPHN1O60890 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.91□□□□□ -1.62
OPHN1O60890 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.91□□□□□ -1.62
OPHN1O60890 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.91□□□□□ -1.62
OPHN1O60890 AC110743.1-201ENST00000584870 478 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.91□□□□□ -1.62
OPHN1O60890 AC245014.2-201ENST00000603689 287 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 AC020910.3-201ENST00000603701 874 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 AC246785.4-201ENST00000605374 287 ntBASIC4.91□□□□□ -1.62
OPHN1O60890 LARP7P1-201ENST00000605576 316 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms