Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 DNAJC19P1-201ENST00000455312 319 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 MTCO1P42-201ENST00000457379 726 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 MTND2P28-201ENST00000457540 1044 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 RNU6-956P-201ENST00000458868 103 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AP000873.1-201ENST00000463987 400 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 RN7SL860P-201ENST00000473738 223 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AP000926.1-201ENST00000479573 241 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 MTND4P2-201ENST00000507767 1203 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AC017037.2-201ENST00000513850 890 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 RNU6-1003P-201ENST00000517099 105 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 IGHV3-32-201ENST00000519182 355 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AC084783.1-201ENST00000565846 910 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AC140113.4-201ENST00000622087 222 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AC138649.5-201ENST00000637456 137 ntBASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL4A3BPQ9Y5P4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL4A3BPQ9Y5P4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL4A3BPQ9Y5P4 AC092125.1-201ENST00000562568 1995 ntBASIC5.09□□□□□ -1.6
COL4A3BPQ9Y5P4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.09□□□□□ -1.6
COL4A3BPQ9Y5P4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL4A3BPQ9Y5P4 AC011460.1-201ENST00000636268 1834 ntBASIC5.09□□□□□ -1.6
COL4A3BPQ9Y5P4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 Y_RNA.51-201ENST00000362725 102 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 RNU6-1155P-201ENST00000363554 107 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 RNA5SP235-201ENST00000365411 114 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 SNORD3H-201ENST00000384486 214 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 RN7SKP235-201ENST00000410662 305 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 RPL22P17-201ENST00000438729 315 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 TAF9P1-201ENST00000445421 515 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 USP9YP12-201ENST00000450481 570 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 AC234775.1-201ENST00000454247 670 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 TAF9P2-201ENST00000454958 515 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 UBDP1-202ENST00000457888 382 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 AC010424.1-201ENST00000506336 297 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 FABP5P5-201ENST00000515537 406 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 RNA5SP464-201ENST00000516251 108 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 RNU6-528P-201ENST00000516926 100 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 AP003497.1-201ENST00000528472 562 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 DYNLL1P4-201ENST00000549314 266 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 AC091178.1-203ENST00000584586 279 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 XIAPP1-201ENST00000603162 600 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 AL359999.1-201ENST00000604513 294 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 RN7SKP299-201ENST00000606679 301 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 AL161637.1-201ENST00000622380 412 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 AC004777.1-201ENST00000624317 287 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 AC009902.3-201ENST00000606235 2172 ntBASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL4A3BPQ9Y5P4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 AC139713.2-214ENST00000642059 1811 ntBASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 MIR659-201ENST00000384963 97 ntBASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 RNU11-4P-201ENST00000391149 133 ntBASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 AL138880.1-201ENST00000405824 642 ntBASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 ELOCP19-201ENST00000411919 318 ntBASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 RPL18P10-201ENST00000425606 538 ntBASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 AC114495.1-201ENST00000441274 436 ntBASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 RPL23AP41-201ENST00000484754 458 ntBASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 AC013356.1-201ENST00000489027 564 ntBASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.07□□□□□ -1.6
COL4A3BPQ9Y5P4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms