Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 TVP23CP2-201ENST00000571473 623 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 HNRNPCP4-201ENST00000571636 900 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC005261.5-201ENST00000596280 355 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC112230.1-201ENST00000604342 547 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC087045.1-201ENST00000605856 382 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC008966.2-201ENST00000606157 453 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC131238.1-201ENST00000617135 328 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AL136221.1-201ENST00000621449 509 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 AC015871.5-202ENST00000623252 701 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 INTS6P1-201ENST00000504674 2530 ntBASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PPARGC1AQ9UBK2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AL031119.1-201ENST00000404707 1879 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 RN7SKP104-201ENST00000362605 328 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 RN7SKP95-201ENST00000362860 303 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 RNU6-1226P-201ENST00000384317 107 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC013442.1-201ENST00000397347 228 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC069218.2-201ENST00000411665 344 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AL138785.1-201ENST00000425821 331 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 RWDD4P2-201ENST00000426392 563 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 BRWD1P3-201ENST00000428816 390 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 PSMD10P3-201ENST00000437000 448 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 SDCBPP1-201ENST00000440192 890 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 TPT1P14-201ENST00000448018 505 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 SNRPGP6-201ENST00000451124 220 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AL691482.1-201ENST00000453255 87 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AP000676.2-201ENST00000529711 301 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 SUB1P2-201ENST00000556401 297 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 MIR4646-201ENST00000580775 63 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AL158211.4-201ENST00000606988 584 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AP001521.2-201ENST00000608772 546 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC093788.1-201ENST00000609356 927 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC092125.1-201ENST00000562568 1995 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 AC126323.6-202ENST00000568092 3511 ntBASIC5.13□□□□□ -1.59
PPARGC1AQ9UBK2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 SNORA73.1-201ENST00000363107 205 ntBASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 RNA5SP391-201ENST00000363456 119 ntBASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 Y_RNA.159-201ENST00000363674 87 ntBASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 RNU6-282P-201ENST00000365357 103 ntBASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 SNORA70.10-201ENST00000384515 134 ntBASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 RNU6-878P-201ENST00000384578 110 ntBASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 AL109941.1-201ENST00000401925 229 ntBASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 AL356421.1-201ENST00000403255 413 ntBASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 MIR1271-201ENST00000408537 86 ntBASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 RNU6-908P-201ENST00000410160 94 ntBASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 RN7SKP263-201ENST00000411194 309 ntBASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 AL359704.1-201ENST00000411586 781 ntBASIC5.12□□□□□ -1.59
PPARGC1AQ9UBK2 AC078974.1-201ENST00000411597 223 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms