Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 SDHCP2-201ENST00000398565 501 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 MIR937-201ENST00000401271 86 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 OR2B8P-201ENST00000432841 938 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 MTCYBP45-201ENST00000435243 565 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 RPS4XP10-201ENST00000465034 731 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 ACTR3P3-201ENST00000480448 893 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC013356.1-201ENST00000489027 564 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC011005.3-201ENST00000491624 395 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 RPL36AP41-201ENST00000493820 306 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC096751.1-202ENST00000502691 1067 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC138853.1-201ENST00000503549 823 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 NDUFB4P2-201ENST00000509515 391 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 RNU6-1003P-201ENST00000517099 105 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC134698.5-201ENST00000519444 336 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC103710.1-201ENST00000610003 901 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC105429.2-201ENST00000610567 517 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC055839.1-201ENST00000634467 498 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC017104.4-201ENST00000636283 1592 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 AC087190.4-201ENST00000574616 8334 ntBASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 RNA5SP258-201ENST00000362750 119 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 RNU6-97P-201ENST00000363387 104 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 Y_RNA.234-201ENST00000364409 97 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 RNU5A-6P-201ENST00000384136 116 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 RNU6-297P-201ENST00000384636 107 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 MIR550A3-201ENST00000390735 95 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 RNU6-248P-201ENST00000410720 107 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 RPS3AP3-201ENST00000411933 242 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 HMGB3P23-201ENST00000414981 585 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 C8orf59P1-201ENST00000429930 303 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 AC073614.1-201ENST00000438690 650 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 RPL12P3-201ENST00000440080 396 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 AC073587.1-201ENST00000447093 876 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 RPL29P29-201ENST00000448725 423 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 RN7SL610P-201ENST00000463845 291 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 AC006967.1-201ENST00000467608 589 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 AC092324.1-201ENST00000468671 324 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 AC009977.1-201ENST00000586015 570 ntBASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM54Q9BYV2 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 AL590240.1-201ENST00000334118 313 ntBASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 RNU1-108P-201ENST00000362556 161 ntBASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 RNU1-94P-201ENST00000362627 173 ntBASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.49□□□□□ -1.69
TRIM54Q9BYV2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms