Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MIR105-1-201ENST00000385222 81 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 MTND1P23-201ENST00000416931 372 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL022400.1-201ENST00000423946 935 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC093422.3-201ENST00000428506 305 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL031659.1-201ENST00000447075 539 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 SNORD19B-201ENST00000459623 84 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 OR2A3P-201ENST00000493774 953 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RPS24P16-201ENST00000497294 392 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ACTR3BP4-201ENST00000503033 1244 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC074250.1-201ENST00000511117 192 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC023632.4-201ENST00000517783 191 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC010487.1-201ENST00000594408 1172 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC008814.1-201ENST00000603797 406 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL357559.1-201ENST00000622228 274 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 MIR7843-201ENST00000622274 79 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 U6.105-201ENST00000637379 88 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 PCDHA4-204ENST00000618834 10557 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 PTPN4-201ENST00000263708 10300 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 COL6A4P1-202ENST00000487147 4317 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 SNORA60-201ENST00000362396 134 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RNU6-562P-201ENST00000362731 107 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 SNORA20.1-201ENST00000364790 130 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RNU6-702P-201ENST00000364982 107 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 HMGB1P3-201ENST00000502802 616 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC074255.1-201ENST00000511259 501 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RNU6-426P-201ENST00000516464 97 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AP000654.2-201ENST00000605633 586 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL008729.2-201ENST00000606393 473 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 LINC02035-201ENST00000610128 5476 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC016716.1-201ENST00000265882 708 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.61-201ENST00000362835 102 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RNU6-829P-201ENST00000363700 112 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.384-201ENST00000383909 102 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RNU6-1124P-201ENST00000384169 107 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RNU6-417P-201ENST00000384712 107 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 RN7SKP222-201ENST00000410651 315 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 SFR1P2-201ENST00000421841 730 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ELOCP11-201ENST00000436690 332 ntBASIC1.54□□□□□ -2.16
HMCN1Q96RW7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.54□□□□□ -2.16
HMCN1Q96RW7 ELOCP16-201ENST00000444494 332 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms