Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 RNU6-1107P-201ENST00000364817 104 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 RNU6-969P-201ENST00000383900 105 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 RNU6-142P-201ENST00000384019 107 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 MIR498-201ENST00000385134 124 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 MIR526A2-201ENST00000390198 65 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 RNU6-821P-201ENST00000390995 107 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 SNORA26.5-201ENST00000391215 123 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AL355497.1-201ENST00000406262 551 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AL391219.1-201ENST00000422570 483 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AL445687.1-201ENST00000439946 251 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AC010095.1-201ENST00000443543 144 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AC016027.4-201ENST00000450866 277 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 RN7SL705P-201ENST00000481678 294 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AC018448.1-201ENST00000552843 316 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 MIR5688-201ENST00000580619 83 ntBASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MS4A3Q96HJ5 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 RNU5A-1-201ENST00000362698 116 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 Y_RNA.287-201ENST00000364853 94 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 Y_RNA.329-201ENST00000365209 107 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 RNU1-16P-201ENST00000365477 164 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AL139327.1-201ENST00000382988 348 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 MIR128-2-201ENST00000384893 84 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 MIR34A-201ENST00000385130 110 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AL353151.1-201ENST00000402406 604 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AC016712.1-201ENST00000431088 378 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 RPL12P46-201ENST00000436610 195 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AL590682.1-201ENST00000437248 344 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 RPS29P5-201ENST00000452777 171 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 RPS14P8-201ENST00000478778 369 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AC012158.1-204ENST00000483430 465 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AC127024.1-201ENST00000490847 418 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 FTH1P23-201ENST00000492727 550 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 RNA5SP471-201ENST00000516971 106 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AC006199.1-201ENST00000548728 219 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AC129492.5-201ENST00000603489 315 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AL355480.4-201ENST00000626823 69 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 MIR4496-201ENST00000635896 61 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AC110716.2-201ENST00000563865 3945 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AC092821.3-202ENST00000641304 2767 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 AC022819.1-201ENST00000563495 3910 ntBASIC6.68□□□□□ -1.34
MS4A3Q96HJ5 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
MS4A3Q96HJ5 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms