Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AL121768.1-201ENST00000613917 2544 ntBASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 EXOC5P1-201ENST00000510543 1969 ntBASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 AC023421.1-201ENST00000590535 1785 ntBASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 AC104837.1-201ENST00000444644 1587 ntBASIC6.06□□□□□ -1.44
SNIP1Q8TAD8 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 SHQ1P1-201ENST00000437111 1544 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 OR52B5P-204ENST00000641744 3467 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 Y_RNA.383-201ENST00000383855 97 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 Y_RNA.418-201ENST00000384029 102 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 Y_RNA.458-201ENST00000384240 102 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 AC239809.1-201ENST00000450470 217 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 SNORD121B-201ENST00000458838 81 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 AL136126.1-201ENST00000473603 402 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 RPL7P47-201ENST00000497299 556 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 RN7SKP238-201ENST00000516483 249 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 IGHV4-55-201ENST00000520889 368 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 AC130365.2-201ENST00000525882 1201 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 AC018552.1-201ENST00000562099 811 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 MIR4300-201ENST00000581016 96 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 AC007619.2-201ENST00000605743 379 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 AC091768.1-201ENST00000609258 930 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 AL352984.2-201ENST00000611153 546 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 AP000560.1-201ENST00000624150 1937 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNIP1Q8TAD8 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 DOCK11P1-201ENST00000553480 5932 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 AC009120.2-204ENST00000621548 2032 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 RNU6-215P-201ENST00000365169 102 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 RNU6-1329P-201ENST00000365664 107 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 Y_RNA.541-201ENST00000384640 113 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 SNORA69.1-201ENST00000390904 137 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 RPS29P13-201ENST00000402041 169 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 U3.39-201ENST00000408569 239 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 RN7SKP286-201ENST00000410894 299 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 RN7SKP293-201ENST00000411389 296 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 BMS1P22-201ENST00000414726 313 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 AC092423.1-201ENST00000430165 186 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 AC005094.1-201ENST00000440420 368 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 AC068522.1-201ENST00000482895 345 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 MRPL42P6-201ENST00000486397 371 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 AC093767.1-201ENST00000504523 156 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 SEPT14P8-201ENST00000508026 178 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 NDUFB4P9-201ENST00000511646 388 ntBASIC6.04□□□□□ -1.44
SNIP1Q8TAD8 ATP5LP3-201ENST00000514223 304 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms