Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC092470.1-201ENST00000546187 132 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC084824.1-201ENST00000550917 1005 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AL163153.1-201ENST00000554223 283 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC005476.1-201ENST00000554427 397 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 MTCO3P24-201ENST00000572729 782 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 MIR4474-201ENST00000579189 78 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 U73479.1-201ENST00000618062 168 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AL121594.5-201ENST00000631724 573 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 MTND5P31-201ENST00000419366 1374 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 AP001350.1-201ENST00000601906 1524 ntBASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.24□□□□□ -1.89
NUDCD3Q8IVD9 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 RNA5SP119-201ENST00000362715 117 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 RNU6-353P-201ENST00000364266 108 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 RNA5SP515-201ENST00000364570 118 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 MIR16-1-201ENST00000385271 89 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 SFR1P1-201ENST00000403720 688 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 TAF13P2-201ENST00000416876 286 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 RPL21P66-201ENST00000426566 466 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AL512637.2-201ENST00000431287 1256 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AL365440.1-201ENST00000436135 2167 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AL050341.1-201ENST00000447743 313 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AC073387.1-201ENST00000453261 709 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 RPL5P24-201ENST00000463742 885 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AC025518.1-201ENST00000479856 347 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 HMGB1P22-201ENST00000505315 124 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AC119751.1-201ENST00000513357 765 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 IGKV2-26-201ENST00000518305 343 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AP001207.1-201ENST00000524051 481 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AC103843.2-201ENST00000530523 682 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AC107954.1-201ENST00000565906 727 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 SGO1P1-201ENST00000603525 1447 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AC013468.1-201ENST00000608680 598 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AC105227.2-201ENST00000615075 605 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AL079305.1-201ENST00000623159 3008 ntBASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
NUDCD3Q8IVD9 AC116096.1-201ENST00000566804 2314 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 RNU1-85P-201ENST00000364127 164 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 RNU6-921P-201ENST00000384361 107 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 SNORD17-201ENST00000390930 237 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AC233981.1-201ENST00000423224 461 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 RPL7P46-201ENST00000425129 740 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AC096632.1-201ENST00000427395 310 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 ATP5JP1-201ENST00000431631 322 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AC234064.1-201ENST00000436312 247 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 HMGB3P6-201ENST00000444896 598 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 HMGN3P1-201ENST00000453847 193 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 RPL21P18-201ENST00000469899 480 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 OR8K4P-201ENST00000534608 872 ntBASIC3.22□□□□□ -1.89
NUDCD3Q8IVD9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms