Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VRK3Q8IV63 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
VRK3Q8IV63 AC090017.1-201ENST00000548612 1779 ntBASIC4.53□□□□□ -1.69
VRK3Q8IV63 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.53□□□□□ -1.69
VRK3Q8IV63 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
VRK3Q8IV63 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VRK3Q8IV63 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VRK3Q8IV63 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VRK3Q8IV63 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VRK3Q8IV63 OR11H4-201ENST00000315409 1082 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 RNU6-845P-201ENST00000362578 103 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 Y_RNA.86-201ENST00000363020 111 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 RNY4P34-201ENST00000364779 95 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VRK3Q8IV63 UBBP2-201ENST00000376781 231 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 MIR298-201ENST00000401212 88 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 RN7SKP266-201ENST00000410232 287 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 RNA5SP118-201ENST00000410385 109 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 AL445669.1-201ENST00000426743 755 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 NPM1P34-201ENST00000428821 893 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 FCF1P1-201ENST00000432690 571 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 AL359265.2-201ENST00000434367 631 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 AL772161.1-201ENST00000439130 476 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 AL031584.1-201ENST00000447169 754 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 Z82190.1-201ENST00000454534 490 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 SCARNA10-201ENST00000459255 330 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 MEMO1P3-201ENST00000459811 302 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 AL591473.1-201ENST00000464297 313 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 RN7SL354P-201ENST00000469282 294 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC114967.1-201ENST00000504890 259 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 HSPA8P13-201ENST00000523715 472 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC107954.1-201ENST00000565906 727 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 RN7SL690P-201ENST00000582087 240 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 AL162413.1-201ENST00000603198 110 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 RNF138P2-201ENST00000603490 592 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC012507.3-201ENST00000603556 477 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 COX6CP4-201ENST00000605798 228 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC011816.2-201ENST00000607089 556 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 AL161616.1-201ENST00000611867 286 ntBASIC4.52□□□□□ -1.69
VRK3Q8IV63 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VRK3Q8IV63 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.52□□□□□ -1.69
VRK3Q8IV63 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VRK3Q8IV63 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VRK3Q8IV63 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VRK3Q8IV63 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VRK3Q8IV63 RNF6P1-201ENST00000444889 1784 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 RNY3P3-201ENST00000363816 102 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 RNU6-115P-201ENST00000364310 107 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VRK3Q8IV63 RNU6-767P-201ENST00000384132 107 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 RNU6-769P-201ENST00000384407 104 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 MIR659-201ENST00000384963 97 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 RNU2-22P-201ENST00000411266 212 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 RNU6-195P-201ENST00000411352 109 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 Z74021.1-201ENST00000423610 407 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 ISCA1P6-201ENST00000427740 390 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.51□□□□□ -1.69
VRK3Q8IV63 LSM1P1-201ENST00000438629 273 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 AC073264.2-201ENST00000448886 166 ntBASIC4.51□□□□□ -1.69
VRK3Q8IV63 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms