Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 ZNF72P-201ENST00000425869 1908 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 PNPT1P2-201ENST00000456768 2050 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 MIR221-201ENST00000385135 110 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 VN1R17P-201ENST00000472048 1090 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 MTND5P19-201ENST00000424872 1794 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 U8.13-201ENST00000390842 128 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 RPL7P52-201ENST00000449200 742 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 OR6K1P-201ENST00000456766 971 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 RPS29P11-201ENST00000496507 171 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 SCARNA17.1-201ENST00000516211 143 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 SCARNA17.2-201ENST00000516334 143 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 AP001207.1-201ENST00000524051 481 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 AC092851.1-201ENST00000535964 478 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 YWHAZP1-201ENST00000556286 722 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 AC016590.3-201ENST00000611171 753 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 SCARNA17.4-201ENST00000614296 143 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 CUL1P1-201ENST00000509510 2425 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 RNA5SP88-201ENST00000365560 109 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 RPS12P2-201ENST00000439728 269 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 VN1R48P-201ENST00000448149 1036 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 RPS27P29-201ENST00000463110 252 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 MTHFD2P4-201ENST00000515074 1025 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 SNORA70.14-201ENST00000516205 110 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 AC004825.2-201ENST00000616634 455 ntBASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VPS13DQ5THJ4 AC004987.3-201ENST00000413879 771 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 KCTD9P5-201ENST00000504141 1170 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AGGF1P8-201ENST00000562979 1000 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AC022069.1-201ENST00000582910 658 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AL356266.1-201ENST00000623311 483 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 MIR592-201ENST00000384959 97 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AC069218.2-201ENST00000411665 344 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AL451074.5-201ENST00000415894 435 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 RPS26P24-201ENST00000497656 331 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 RN7SKP31-201ENST00000516354 278 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AL137072.1-201ENST00000603444 466 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 SYT14P1-202ENST00000600441 1448 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 RN7SKP32-201ENST00000410167 303 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AL009174.1-201ENST00000426577 416 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AC034244.2-201ENST00000514668 858 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 RNU6-295P-201ENST00000516901 104 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 RANP3-201ENST00000530970 276 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 BNIP3P8-201ENST00000597863 560 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AP000526.1-201ENST00000603308 1388 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 MIR137-201ENST00000385223 102 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 HMGB3P23-201ENST00000414981 585 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AC126182.1-201ENST00000478134 357 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 DYNLL1P6-201ENST00000503440 264 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AC026436.1-201ENST00000510537 270 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AC025034.2-201ENST00000623264 286 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 AC084035.1-201ENST00000634543 607 ntBASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS13DQ5THJ4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC1.65□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms