Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.17□□□□□ -1.74
CLCN3P51790 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.17□□□□□ -1.74
CLCN3P51790 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.17□□□□□ -1.74
CLCN3P51790 AC010620.1-201ENST00000601088 1102 ntBASIC4.17□□□□□ -1.74
CLCN3P51790 AL139395.1-201ENST00000603662 160 ntBASIC4.17□□□□□ -1.74
CLCN3P51790 AC024220.1-201ENST00000603675 484 ntBASIC4.17□□□□□ -1.74
CLCN3P51790 SNORA62.6-201ENST00000606322 83 ntBASIC4.17□□□□□ -1.74
CLCN3P51790 RNU1-30P-201ENST00000606575 163 ntBASIC4.17□□□□□ -1.74
CLCN3P51790 AC069209.1-201ENST00000619282 651 ntBASIC4.17□□□□□ -1.74
CLCN3P51790 AC131159.1-201ENST00000621854 213 ntBASIC4.17□□□□□ -1.74
CLCN3P51790 AC000123.2-201ENST00000623124 461 ntBASIC4.17□□□□□ -1.74
CLCN3P51790 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLCN3P51790 AC009093.8-201ENST00000641769 292 ntBASIC4.17□□□□□ -1.74
CLCN3P51790 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLCN3P51790 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
CLCN3P51790 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLCN3P51790 LINC00561-201ENST00000565815 2738 ntBASIC4.17□□□□□ -1.74
CLCN3P51790 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLCN3P51790 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
CLCN3P51790 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN3P51790 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCN3P51790 ZNF37BP-203ENST00000452306 1352 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCN3P51790 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN3P51790 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN3P51790 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN3P51790 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN3P51790 Y_RNA.408-201ENST00000383987 102 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLCN3P51790 RNU2-28P-201ENST00000410457 189 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC068533.2-201ENST00000411872 306 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 RAP1BP1-201ENST00000412709 553 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.16□□□□□ -1.74
CLCN3P51790 AC004552.1-201ENST00000419089 348 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 YME1L1P1-201ENST00000429435 297 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC011742.1-201ENST00000431448 434 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 ELOCP18-201ENST00000434209 337 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AL445567.1-201ENST00000439121 144 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AL353748.1-201ENST00000440753 474 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 MTND3P1-201ENST00000441336 220 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCN3P51790 SLC31A1P1-201ENST00000451221 567 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 BX276092.4-201ENST00000452056 248 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCN3P51790 MTND1P16-201ENST00000465177 898 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 RPS26P3-201ENST00000470205 348 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC022034.3-201ENST00000471393 478 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC084198.1-201ENST00000477747 402 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN3P51790 AC090543.2-201ENST00000483963 348 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC004057.1-201ENST00000485827 348 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 RPL7P38-201ENST00000488396 739 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCN3P51790 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCN3P51790 AF186190.1-201ENST00000517470 480 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC105185.1-201ENST00000518705 535 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCN3P51790 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.16□□□□□ -1.74
CLCN3P51790 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN3P51790 SLC2A13P1-201ENST00000531560 322 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCN3P51790 CCNG2P1-201ENST00000549521 1000 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.16□□□□□ -1.74
CLCN3P51790 AC135628.1-201ENST00000568867 534 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC002400.1-201ENST00000569310 726 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCN3P51790 AL109653.1-201ENST00000603091 248 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 Z99497.2-201ENST00000603634 310 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AP001521.1-201ENST00000609150 300 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC105429.2-201ENST00000610567 517 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AP000676.3-201ENST00000623299 569 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC067931.1-201ENST00000624190 671 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC139792.2-201ENST00000624218 587 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AL356121.2-201ENST00000624715 780 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 MIR4496-201ENST00000635896 61 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AC007671.2-201ENST00000637344 619 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCN3P51790 AC119674.1-207ENST00000641355 633 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN3P51790 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCN3P51790 AC018529.3-201ENST00000624212 2254 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 AL390862.1-201ENST00000635467 1469 ntBASIC4.16□□□□□ -1.74
CLCN3P51790 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN3P51790 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLCN3P51790 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLCN3P51790 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
CLCN3P51790 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLCN3P51790 UBE3AP2-201ENST00000429033 2259 ntBASIC4.15□□□□□ -1.74
CLCN3P51790 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLCN3P51790 AL161912.2-201ENST00000565707 3007 ntBASIC4.15□□□□□ -1.74
CLCN3P51790 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CLCN3P51790 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CLCN3P51790 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLCN3P51790 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLCN3P51790 RNU6-984P-201ENST00000363236 109 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 RNA5SP51-201ENST00000364750 119 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 AL356131.1-201ENST00000405826 414 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.15□□□□□ -1.75
CLCN3P51790 RNU4-72P-201ENST00000410754 173 ntBASIC4.15□□□□□ -1.75
CLCN3P51790 TIMM9P2-201ENST00000419324 266 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms