Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MTND4LP11-201ENST00000422184 280 ntBASIC4□□□□□ -1.77
SOX2P48431 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4□□□□□ -1.77
SOX2P48431 AL138785.1-201ENST00000425821 331 ntBASIC4□□□□□ -1.77
SOX2P48431 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4□□□□□ -1.77
SOX2P48431 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4□□□□□ -1.77
SOX2P48431 AC009961.2-201ENST00000435771 251 ntBASIC4□□□□□ -1.77
SOX2P48431 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4□□□□□ -1.77
SOX2P48431 UBE2V1P8-201ENST00000437166 265 ntBASIC4□□□□□ -1.77
SOX2P48431 ARPC3P1-201ENST00000437218 533 ntBASIC4□□□□□ -1.77
SOX2P48431 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4□□□□□ -1.77
SOX2P48431 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4□□□□□ -1.77
SOX2P48431 AC073587.1-201ENST00000447093 876 ntBASIC4□□□□□ -1.77
SOX2P48431 RPL7P52-201ENST00000449200 742 ntBASIC4□□□□□ -1.77
SOX2P48431 NDUFS5P3-201ENST00000450668 321 ntBASIC4□□□□□ -1.77
SOX2P48431 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4□□□□□ -1.77
SOX2P48431 RPS5P7-201ENST00000456664 608 ntBASIC4□□□□□ -1.77
SOX2P48431 snoU13.8-201ENST00000458890 104 ntBASIC4□□□□□ -1.77
SOX2P48431 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4□□□□□ -1.77
SOX2P48431 MTND1P3-201ENST00000484956 952 ntBASIC4□□□□□ -1.77
SOX2P48431 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4□□□□□ -1.77
SOX2P48431 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
SOX2P48431 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4□□□□□ -1.77
SOX2P48431 RNU6-201P-201ENST00000517100 61 ntBASIC4□□□□□ -1.77
SOX2P48431 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4□□□□□ -1.77
SOX2P48431 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4□□□□□ -1.77
SOX2P48431 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4□□□□□ -1.77
SOX2P48431 AP003122.4-201ENST00000530980 758 ntBASIC4□□□□□ -1.77
SOX2P48431 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4□□□□□ -1.77
SOX2P48431 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4□□□□□ -1.77
SOX2P48431 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4□□□□□ -1.77
SOX2P48431 AL133241.1-201ENST00000556832 487 ntBASIC4□□□□□ -1.77
SOX2P48431 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4□□□□□ -1.77
SOX2P48431 AL391840.1-201ENST00000571144 367 ntBASIC4□□□□□ -1.77
SOX2P48431 AC034268.2-201ENST00000571784 482 ntBASIC4□□□□□ -1.77
SOX2P48431 NRBF2P1-201ENST00000587407 859 ntBASIC4□□□□□ -1.77
SOX2P48431 OR4G1P-201ENST00000588632 938 ntBASIC4□□□□□ -1.77
SOX2P48431 HMGN1P30-201ENST00000589286 268 ntBASIC4□□□□□ -1.77
SOX2P48431 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4□□□□□ -1.77
SOX2P48431 CKS1BP3-201ENST00000600888 237 ntBASIC4□□□□□ -1.77
SOX2P48431 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4□□□□□ -1.77
SOX2P48431 AP000860.1-201ENST00000605250 559 ntBASIC4□□□□□ -1.77
SOX2P48431 RNU6-87P-201ENST00000607561 108 ntBASIC4□□□□□ -1.77
SOX2P48431 AF250324.2-201ENST00000608299 610 ntBASIC4□□□□□ -1.77
SOX2P48431 AC091304.9-201ENST00000612091 226 ntBASIC4□□□□□ -1.77
SOX2P48431 AC090970.3-201ENST00000612566 866 ntBASIC4□□□□□ -1.77
SOX2P48431 AL596245.1-201ENST00000618994 362 ntBASIC4□□□□□ -1.77
SOX2P48431 AL158209.2-201ENST00000619266 216 ntBASIC4□□□□□ -1.77
SOX2P48431 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SOX2P48431 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4□□□□□ -1.77
SOX2P48431 CR381653.2-201ENST00000624041 768 ntBASIC4□□□□□ -1.77
SOX2P48431 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4□□□□□ -1.77
SOX2P48431 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
SOX2P48431 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4□□□□□ -1.77
SOX2P48431 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4□□□□□ -1.77
SOX2P48431 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SOX2P48431 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX2P48431 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SOX2P48431 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SOX2P48431 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SOX2P48431 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX2P48431 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SOX2P48431 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.99□□□□□ -1.77
SOX2P48431 AC015813.6-201ENST00000624409 5808 ntBASIC3.99□□□□□ -1.77
SOX2P48431 GNG5P1-201ENST00000255500 204 ntBASIC3.99□□□□□ -1.77
SOX2P48431 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SOX2P48431 AC067945.1-201ENST00000342609 618 ntBASIC3.99□□□□□ -1.77
SOX2P48431 U8.4-201ENST00000363626 134 ntBASIC3.99□□□□□ -1.77
SOX2P48431 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 RNU1-63P-201ENST00000383902 164 ntBASIC3.99□□□□□ -1.77
SOX2P48431 RNU1-44P-201ENST00000384453 163 ntBASIC3.99□□□□□ -1.77
SOX2P48431 MIR323B-201ENST00000385269 82 ntBASIC3.99□□□□□ -1.77
SOX2P48431 RPL17P50-201ENST00000396131 546 ntBASIC3.99□□□□□ -1.77
SOX2P48431 RPL36AP36-201ENST00000418616 301 ntBASIC3.99□□□□□ -1.77
SOX2P48431 AL139415.2-201ENST00000431968 163 ntBASIC3.99□□□□□ -1.77
SOX2P48431 MTCYBP45-201ENST00000435243 565 ntBASIC3.99□□□□□ -1.77
SOX2P48431 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SOX2P48431 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 AP1S2P1-201ENST00000457344 379 ntBASIC3.99□□□□□ -1.77
SOX2P48431 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.99□□□□□ -1.77
SOX2P48431 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 AC109462.1-201ENST00000491087 368 ntBASIC3.99□□□□□ -1.77
SOX2P48431 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX2P48431 GAPDHP56-201ENST00000506031 988 ntBASIC3.99□□□□□ -1.77
SOX2P48431 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX2P48431 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX2P48431 RNA5SP92-201ENST00000516437 110 ntBASIC3.99□□□□□ -1.77
SOX2P48431 RNU2-46P-201ENST00000517038 113 ntBASIC3.99□□□□□ -1.77
SOX2P48431 AC090151.1-201ENST00000520784 730 ntBASIC3.99□□□□□ -1.77
SOX2P48431 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 OR5BC1P-201ENST00000529327 739 ntBASIC3.99□□□□□ -1.77
SOX2P48431 DEFB109D-201ENST00000529497 240 ntBASIC3.99□□□□□ -1.77
SOX2P48431 PTP4A1P6-201ENST00000531034 478 ntBASIC3.99□□□□□ -1.77
SOX2P48431 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX2P48431 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.99□□□□□ -1.77
SOX2P48431 AC124947.2-202ENST00000552735 133 ntBASIC3.99□□□□□ -1.77
SOX2P48431 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms