Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 OR4K8P-201ENST00000578842 1048 ntBASIC5.32□□□□□ -1.56
CCNFP41002 AC011626.1-201ENST00000604710 562 ntBASIC5.32□□□□□ -1.56
CCNFP41002 MIR8080-201ENST00000622224 89 ntBASIC5.32□□□□□ -1.56
CCNFP41002 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCNFP41002 TPTEP1-208ENST00000636884 213 ntBASIC5.32□□□□□ -1.56
CCNFP41002 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCNFP41002 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCNFP41002 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNFP41002 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCNFP41002 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNFP41002 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNFP41002 AC023421.1-201ENST00000590535 1785 ntBASIC5.32□□□□□ -1.56
CCNFP41002 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CCNFP41002 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.31□□□□□ -1.56
CCNFP41002 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNFP41002 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNFP41002 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.31□□□□□ -1.56
CCNFP41002 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCNFP41002 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNFP41002 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCNFP41002 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNFP41002 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNFP41002 SNORA16A-201ENST00000384342 137 ntBASIC5.31□□□□□ -1.56
CCNFP41002 ENSAP1-201ENST00000392855 326 ntBASIC5.31□□□□□ -1.56
CCNFP41002 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNFP41002 AL136116.1-201ENST00000403591 381 ntBASIC5.31□□□□□ -1.56
CCNFP41002 RN7SKP32-201ENST00000410167 303 ntBASIC5.31□□□□□ -1.56
CCNFP41002 RNA5SP487-201ENST00000410186 122 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AC104333.2-201ENST00000422630 192 ntBASIC5.31□□□□□ -1.56
CCNFP41002 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCNFP41002 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
CCNFP41002 AL121776.1-201ENST00000429337 372 ntBASIC5.31□□□□□ -1.56
CCNFP41002 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.31□□□□□ -1.56
CCNFP41002 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.31□□□□□ -1.56
CCNFP41002 AC093156.1-201ENST00000440382 670 ntBASIC5.31□□□□□ -1.56
CCNFP41002 CYCSP24-201ENST00000445119 316 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.31□□□□□ -1.56
CCNFP41002 AC104308.1-201ENST00000454621 333 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AC022133.1-201ENST00000490961 571 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AC020893.1-201ENST00000502452 580 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.31□□□□□ -1.56
CCNFP41002 MTCO3P9-201ENST00000506989 781 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.31□□□□□ -1.56
CCNFP41002 SNORD116-26-201ENST00000516006 96 ntBASIC5.31□□□□□ -1.56
CCNFP41002 SUB1P1-201ENST00000524415 382 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AC107918.3-201ENST00000533272 382 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.31□□□□□ -1.56
CCNFP41002 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.31□□□□□ -1.56
CCNFP41002 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNFP41002 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.31□□□□□ -1.56
CCNFP41002 AC005341.1-201ENST00000571086 708 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.31□□□□□ -1.56
CCNFP41002 MIR4443-201ENST00000585052 53 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AC010928.3-201ENST00000587712 541 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AP001029.3-201ENST00000588063 596 ntBASIC5.31□□□□□ -1.56
CCNFP41002 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.31□□□□□ -1.56
CCNFP41002 AC113194.1-201ENST00000606037 500 ntBASIC5.31□□□□□ -1.56
CCNFP41002 uc_338.5-201ENST00000611839 155 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AL122125.1-201ENST00000616999 600 ntBASIC5.31□□□□□ -1.56
CCNFP41002 AL160413.1-201ENST00000622780 310 ntBASIC5.31□□□□□ -1.56
CCNFP41002 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCNFP41002 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.31□□□□□ -1.56
CCNFP41002 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.31□□□□□ -1.56
CCNFP41002 AC009902.3-201ENST00000606235 2172 ntBASIC5.31□□□□□ -1.56
CCNFP41002 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.3□□□□□ -1.56
CCNFP41002 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCNFP41002 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCNFP41002 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCNFP41002 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCNFP41002 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.3□□□□□ -1.56
CCNFP41002 SMG1P4-204ENST00000523028 4131 ntBASIC5.3□□□□□ -1.56
CCNFP41002 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCNFP41002 AC004817.4-201ENST00000602396 3625 ntBASIC5.3□□□□□ -1.56
CCNFP41002 AC011155.1-201ENST00000316512 456 ntBASIC5.3□□□□□ -1.56
CCNFP41002 AC005294.1-201ENST00000355509 281 ntBASIC5.3□□□□□ -1.56
CCNFP41002 RNA5SP242-201ENST00000364171 118 ntBASIC5.3□□□□□ -1.56
CCNFP41002 UBBP2-201ENST00000376781 231 ntBASIC5.3□□□□□ -1.56
CCNFP41002 AL590004.1-201ENST00000405321 300 ntBASIC5.3□□□□□ -1.56
CCNFP41002 TXNP7-201ENST00000406296 293 ntBASIC5.3□□□□□ -1.56
CCNFP41002 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.3□□□□□ -1.56
CCNFP41002 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.3□□□□□ -1.56
CCNFP41002 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.3□□□□□ -1.56
CCNFP41002 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.3□□□□□ -1.56
CCNFP41002 AC079168.1-201ENST00000458741 345 ntBASIC5.3□□□□□ -1.56
CCNFP41002 AC022034.3-201ENST00000471393 478 ntBASIC5.3□□□□□ -1.56
CCNFP41002 AL163973.1-201ENST00000484753 577 ntBASIC5.3□□□□□ -1.56
CCNFP41002 RN7SL447P-201ENST00000494711 245 ntBASIC5.3□□□□□ -1.56
CCNFP41002 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.3□□□□□ -1.56
CCNFP41002 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.3□□□□□ -1.56
CCNFP41002 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCNFP41002 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.3□□□□□ -1.56
CCNFP41002 IGLVIV-53-201ENST00000520107 367 ntBASIC5.3□□□□□ -1.56
CCNFP41002 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.3□□□□□ -1.56
CCNFP41002 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.3□□□□□ -1.56
CCNFP41002 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.3□□□□□ -1.56
CCNFP41002 MTCO3P13-201ENST00000577757 781 ntBASIC5.3□□□□□ -1.56
CCNFP41002 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.3□□□□□ -1.56
CCNFP41002 SNORD95-201ENST00000579879 68 ntBASIC5.3□□□□□ -1.56
CCNFP41002 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.3□□□□□ -1.56
CCNFP41002 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms