Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 MTCYBP42-201ENST00000444653 1130 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AL445669.2-201ENST00000454425 421 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AC007537.2-201ENST00000472093 511 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AC012181.1-201ENST00000479895 423 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 MLLT10P2-201ENST00000506434 249 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 SAP18P1-201ENST00000512058 390 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AP001189.2-201ENST00000527320 189 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AC010198.2-201ENST00000550612 259 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 MIR5708-201ENST00000579723 85 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AP001029.3-201ENST00000588063 596 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AL355810.1-201ENST00000614629 552 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AC007275.1-201ENST00000621243 671 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 AC095031.1-201ENST00000623685 672 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 Z99496.1-201ENST00000469424 1477 ntBASIC3.72□□□□□ -1.81
HLA-DPA1P20036 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
HLA-DPA1P20036 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
HLA-DPA1P20036 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 SNORA62.3-201ENST00000365110 153 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 PTP4A1P7-201ENST00000423476 514 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 MTCO1P3-201ENST00000429327 192 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AL035246.1-201ENST00000433554 1255 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 SEPT7P5-201ENST00000434048 306 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 MTND4LP10-201ENST00000435146 291 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 SKP1P1-201ENST00000438081 489 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC093155.1-201ENST00000440164 826 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 VN1R10P-201ENST00000447106 875 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC092757.1-201ENST00000467293 467 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC104629.1-201ENST00000494226 508 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC008427.1-201ENST00000503102 655 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 KLHL2P1-201ENST00000508691 521 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 MIR2114-201ENST00000516645 80 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC008489.1-201ENST00000524271 483 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 SNRPGP16-201ENST00000533275 226 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC018630.1-201ENST00000541376 925 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC008011.1-201ENST00000545989 227 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 MIR1254-2-201ENST00000579553 63 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AL035411.2-201ENST00000604022 421 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AP001330.4-201ENST00000604350 154 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC010738.1-201ENST00000604970 987 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 VIS1.1-201ENST00000610517 203 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AL390240.1-201ENST00000612950 384 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 AC126544.2-201ENST00000625174 749 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 MFSD8-245ENST00000641743 948 ntBASIC3.71□□□□□ -1.82
HLA-DPA1P20036 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HLA-DPA1P20036 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DPA1P20036 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DPA1P20036 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.7□□□□□ -1.82
HLA-DPA1P20036 AC006504.1-201ENST00000562493 3666 ntBASIC3.7□□□□□ -1.82
HLA-DPA1P20036 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HLA-DPA1P20036 AL079342.2-201ENST00000403367 482 ntBASIC3.7□□□□□ -1.82
HLA-DPA1P20036 AL591034.1-201ENST00000407447 340 ntBASIC3.7□□□□□ -1.82
HLA-DPA1P20036 SNORA11-201ENST00000408789 128 ntBASIC3.7□□□□□ -1.82
HLA-DPA1P20036 RN7SKP27-201ENST00000410684 333 ntBASIC3.7□□□□□ -1.82
HLA-DPA1P20036 RNU2-15P-201ENST00000410692 191 ntBASIC3.7□□□□□ -1.82
HLA-DPA1P20036 AC096533.1-201ENST00000411645 353 ntBASIC3.7□□□□□ -1.82
HLA-DPA1P20036 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DPA1P20036 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DPA1P20036 C1DP1-201ENST00000426049 402 ntBASIC3.7□□□□□ -1.82
HLA-DPA1P20036 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DPA1P20036 BMS1P19-201ENST00000433925 393 ntBASIC3.7□□□□□ -1.82
HLA-DPA1P20036 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DPA1P20036 NDUFB1P1-201ENST00000435191 180 ntBASIC3.7□□□□□ -1.82
HLA-DPA1P20036 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.7□□□□□ -1.82
HLA-DPA1P20036 AL645931.1-201ENST00000439737 410 ntBASIC3.7□□□□□ -1.82
HLA-DPA1P20036 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DPA1P20036 AC010655.1-201ENST00000449336 292 ntBASIC3.7□□□□□ -1.82
HLA-DPA1P20036 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.7□□□□□ -1.82
HLA-DPA1P20036 AC017015.1-201ENST00000477387 286 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms