Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 RNA5SP306-201ENST00000411087 107 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 USP9YP33-201ENST00000412220 421 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNQ3O43525 AP000907.1-201ENST00000428428 510 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AL390023.1-201ENST00000428836 262 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNQ3O43525 RPS20P1-201ENST00000434853 354 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 USP9YP35-201ENST00000435696 412 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AL445567.1-201ENST00000439121 144 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNQ3O43525 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KCNQ3O43525 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.81□□□□□ -1.64
KCNQ3O43525 PLGLA-201ENST00000465668 449 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.81□□□□□ -1.64
KCNQ3O43525 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.81□□□□□ -1.64
KCNQ3O43525 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.81□□□□□ -1.64
KCNQ3O43525 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.81□□□□□ -1.64
KCNQ3O43525 RNU6-759P-201ENST00000516740 103 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.81□□□□□ -1.64
KCNQ3O43525 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.81□□□□□ -1.64
KCNQ3O43525 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNQ3O43525 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNQ3O43525 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNQ3O43525 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.81□□□□□ -1.64
KCNQ3O43525 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.81□□□□□ -1.64
KCNQ3O43525 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNQ3O43525 AC012435.1-202ENST00000568772 240 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AC105129.3-201ENST00000605455 485 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AC112220.3-201ENST00000605502 502 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AC080013.6-201ENST00000606185 215 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AC019176.2-201ENST00000611579 315 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AL359535.1-201ENST00000612100 1087 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AC015908.5-201ENST00000623289 343 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AC098679.5-201ENST00000624394 571 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AC120349.2-201ENST00000625002 298 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AC092184.1-201ENST00000625042 715 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 AL392088.2-201ENST00000637607 285 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 LINC01109-201ENST00000603837 3081 ntBASIC4.81□□□□□ -1.64
KCNQ3O43525 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KCNQ3O43525 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
KCNQ3O43525 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KCNQ3O43525 AC068254.2-201ENST00000623938 3577 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KCNQ3O43525 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
KCNQ3O43525 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNQ3O43525 Y_RNA.18-201ENST00000362461 102 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 SNORD9-201ENST00000362566 104 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 RNU6-216P-201ENST00000363282 104 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 Y_RNA.560-201ENST00000384689 102 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 SNORA68.2-201ENST00000391263 128 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 AC068533.2-201ENST00000411872 306 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNQ3O43525 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNQ3O43525 DBIP2-201ENST00000419076 262 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 AC096632.1-201ENST00000427395 310 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNQ3O43525 AL159987.2-201ENST00000432754 307 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNQ3O43525 MTCYBP39-201ENST00000437562 491 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.8□□□□□ -1.64
KCNQ3O43525 RPS26P56-201ENST00000444468 240 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 AL606662.1-201ENST00000445763 553 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 AC073587.1-201ENST00000447093 876 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 MTCO1P48-201ENST00000448024 1096 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 MTCO3P16-201ENST00000454456 754 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 AC092754.2-201ENST00000463506 460 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 RPS4XP10-201ENST00000465034 731 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNQ3O43525 RPL7P38-201ENST00000488396 739 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.8□□□□□ -1.64
KCNQ3O43525 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNQ3O43525 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNQ3O43525 DUXAP2-201ENST00000519198 589 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.8□□□□□ -1.64
KCNQ3O43525 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNQ3O43525 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNQ3O43525 LSM6P2-201ENST00000552208 177 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.8□□□□□ -1.64
KCNQ3O43525 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNQ3O43525 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNQ3O43525 AL008729.2-201ENST00000606393 473 ntBASIC4.8□□□□□ -1.64
KCNQ3O43525 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNQ3O43525 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNQ3O43525 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNQ3O43525 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNQ3O43525 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
KCNQ3O43525 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNQ3O43525 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KCNQ3O43525 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KCNQ3O43525 ELL2P3-201ENST00000457883 1602 ntBASIC4.79□□□□□ -1.64
KCNQ3O43525 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KCNQ3O43525 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.79□□□□□ -1.64
KCNQ3O43525 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.79□□□□□ -1.64
KCNQ3O43525 AL450326.2-201ENST00000421913 1962 ntBASIC4.79□□□□□ -1.64
KCNQ3O43525 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
KCNQ3O43525 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KCNQ3O43525 RNU6-553P-201ENST00000364047 96 ntBASIC4.79□□□□□ -1.64
KCNQ3O43525 SNORD116-1-201ENST00000384335 95 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms