Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC087879.1-201ENST00000474343 374 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 TPT1P8-201ENST00000510120 555 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC092747.2-201ENST00000545069 983 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC013412.1-201ENST00000610687 192 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC016597.2-201ENST00000613256 341 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AL354976.1-201ENST00000613843 387 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AL157770.1-201ENST00000623049 439 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 HMGB1P5-201ENST00000255320 642 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 RNU6-984P-201ENST00000363236 109 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 MIR124-3-201ENST00000384866 87 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 HSPD1P16-201ENST00000402302 394 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 RPP40P1-201ENST00000426762 456 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 RPS6P2-201ENST00000454208 705 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC087385.1-201ENST00000475062 312 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC139783.2-201ENST00000504847 1145 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC110794.1-201ENST00000505816 425 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 RNA5SP341-201ENST00000516261 117 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC067852.3-201ENST00000589177 561 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC024060.1-201ENST00000607052 494 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC104985.3-201ENST00000623479 597 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AC090772.4-201ENST00000623599 362 ntBASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM4Q9ULL8 AL136964.1-201ENST00000622038 2990 ntBASIC6.65□□□□□ -1.34
SHROOM4Q9ULL8 ELL2P4-201ENST00000446870 1376 ntBASIC6.65□□□□□ -1.34
SHROOM4Q9ULL8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
SHROOM4Q9ULL8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SHROOM4Q9ULL8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 OR52B1P-201ENST00000316506 909 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 RNU6-1066P-201ENST00000363573 105 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 RNU6-115P-201ENST00000364310 107 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 SNORA70E-201ENST00000384492 135 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 RNU6-441P-201ENST00000384545 106 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 RPS12P23-201ENST00000419579 400 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 RWDD4P2-201ENST00000426392 563 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 MTCO1P53-201ENST00000441633 699 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 BX276092.4-201ENST00000452056 248 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 NDUFA5P7-201ENST00000452914 242 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 RPL37P6-202ENST00000464216 403 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 HSPE1P14-201ENST00000605812 302 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 AC123767.1-202ENST00000620407 817 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 AL732618.1-201ENST00000623251 301 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 AP003355.3-201ENST00000623465 114 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 OR1S1-201ENST00000624470 978 ntBASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SHROOM4Q9ULL8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 AC073264.1-201ENST00000411508 416 ntBASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 PSMA2P3-201ENST00000429685 675 ntBASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 VPS26AP1-201ENST00000483197 979 ntBASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 AC104057.1-201ENST00000515547 497 ntBASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 AP001317.1-201ENST00000531194 960 ntBASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 AC007566.2-201ENST00000603642 413 ntBASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 AL009028.1-201ENST00000604895 802 ntBASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SHROOM4Q9ULL8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 RNA5SP197-201ENST00000363357 119 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 AL079342.2-201ENST00000403367 482 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 MTCO3P31-201ENST00000405526 789 ntBASIC6.63□□□□□ -1.35
SHROOM4Q9ULL8 JKAMPP1-201ENST00000413804 919 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms