Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL20A1Q9P218 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL20A1Q9P218 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 NEAT1-202ENST00000501122 22743 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL20A1Q9P218 AP001273.1-201ENST00000624493 3152 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL20A1Q9P218 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL20A1Q9P218 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL20A1Q9P218 RNU4-44P-201ENST00000363050 141 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 U3.4-201ENST00000363352 213 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 RNU5F-7P-201ENST00000363696 115 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 RNU4-6P-201ENST00000410804 122 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 HSPE1P12-201ENST00000412576 301 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 RBMY1KP-201ENST00000423480 476 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 OR8F1P-201ENST00000425243 930 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL20A1Q9P218 BX276092.4-201ENST00000452056 248 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 USP9YP34-201ENST00000453983 808 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC093767.1-201ENST00000504523 156 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 MTND3P5-201ENST00000512798 333 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC016065.2-201ENST00000514530 444 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 PTP4A1P6-201ENST00000531034 478 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 LARP7P2-201ENST00000575306 125 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC006130.2-201ENST00000586202 326 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC093227.2-201ENST00000589357 285 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC112187.2-201ENST00000604345 283 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC113194.1-201ENST00000606037 500 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 AC022893.2-201ENST00000564832 3296 ntBASIC4.69□□□□□ -1.66
COL20A1Q9P218 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL20A1Q9P218 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
COL20A1Q9P218 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL20A1Q9P218 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL20A1Q9P218 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL20A1Q9P218 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL20A1Q9P218 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL20A1Q9P218 RNU4-91P-201ENST00000364778 135 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL389915.1-201ENST00000422463 466 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL365184.2-201ENST00000431139 435 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL358472.1-201ENST00000431295 329 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 RPS29P7-201ENST00000439662 171 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC106872.3-201ENST00000495104 446 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC021678.1-201ENST00000505195 936 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC116347.2-201ENST00000514912 523 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 RN7SKP277-201ENST00000516895 283 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 IGLV3-26-201ENST00000520756 302 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC022861.1-201ENST00000522981 663 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC141257.3-201ENST00000572906 215 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC103987.3-201ENST00000582071 292 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC053481.4-201ENST00000583164 216 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC067852.4-201ENST00000590314 478 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL009028.1-201ENST00000604895 802 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC068276.1-201ENST00000605793 379 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL353600.1-201ENST00000608148 251 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL391497.1-201ENST00000608671 547 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC009318.4-201ENST00000620496 486 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC000123.2-201ENST00000623124 461 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC090582.1-201ENST00000636321 199 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms