Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 U3.25-201ENST00000391209 220 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 MIR450B-201ENST00000401182 78 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 USMG5P1-201ENST00000425964 177 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AC008065.1-201ENST00000428525 348 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AC108734.1-201ENST00000439549 399 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 RANP2-201ENST00000456833 229 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 NXT1P1-201ENST00000458481 316 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 RN7SL165P-201ENST00000477476 291 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 RN7SL326P-201ENST00000477493 296 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 SETP7-201ENST00000552169 453 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 MIR5583-1-201ENST00000580941 59 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AC008521.2-201ENST00000591021 259 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AC009779.6-201ENST00000603972 165 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AC010201.1-201ENST00000605051 540 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AC133644.2-201ENST00000608142 540 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AC103710.2-201ENST00000609912 942 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 MIR6798-201ENST00000612887 67 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AL138825.1-201ENST00000618587 192 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 AP001541.1-201ENST00000623322 1904 ntBASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.03□□□□□ -1.44
CUEDC1Q9NWM3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.44
CUEDC1Q9NWM3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AL122126.1-201ENST00000546905 1318 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 Y_RNA.150-201ENST00000363562 102 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 RNA5SP223-201ENST00000365174 120 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 SNORD14.1-201ENST00000365609 90 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 RNU6-187P-201ENST00000384139 106 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 RNU6-886P-201ENST00000384319 105 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 SNORA17A-201ENST00000391185 133 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 CHEK2P5-201ENST00000423877 246 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 HMGB3P21-201ENST00000452483 547 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 RPS27AP3-201ENST00000453803 454 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 RN7SL174P-201ENST00000475578 289 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 KHDC1P1-201ENST00000511053 508 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 Y_RNA.673-201ENST00000516306 88 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 RNU6-255P-201ENST00000516957 105 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC068446.3-201ENST00000555285 382 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC090651.1-201ENST00000567865 634 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 MTND4LP5-201ENST00000605152 292 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 SNORA74.4-201ENST00000607595 199 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC011155.2-201ENST00000623202 216 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 SNORA17.5-201ENST00000630429 132 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 AC006484.1-201ENST00000435086 1884 ntBASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CUEDC1Q9NWM3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms