Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCM2LQ9NUG4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 ELF2P3-201ENST00000445099 1506 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AC019155.1-201ENST00000382242 574 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 U3.36-201ENST00000408418 213 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 E2F6P2-201ENST00000420708 748 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 FABP7P1-201ENST00000424004 391 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AC233728.2-201ENST00000425348 757 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 USP9YP18-201ENST00000425912 695 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 RPL23AP33-201ENST00000442301 452 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AC079448.1-201ENST00000449377 373 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 MTND1P9-201ENST00000453775 944 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 BX284632.1-201ENST00000478218 541 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 SETP7-201ENST00000552169 453 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AC099489.2-201ENST00000574976 260 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 RN7SL52P-201ENST00000584271 284 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 LLPHP1-201ENST00000603571 367 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AC011816.2-201ENST00000607089 556 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AF250324.2-201ENST00000608299 610 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AL161734.1-201ENST00000609720 557 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AC099669.2-201ENST00000616549 437 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 RN7SL722P-201ENST00000617780 284 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 RN7SL565P-201ENST00000618246 284 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AP000346.3-201ENST00000622821 210 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AL157786.1-207ENST00000627771 695 ntBASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCM2LQ9NUG4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 RNU6-989P-201ENST00000362756 107 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 SNORA66-201ENST00000384792 133 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 RNU4-55P-201ENST00000410731 137 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 MTND1P23-201ENST00000416931 372 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 MTND3P17-201ENST00000416968 344 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 AL360081.1-201ENST00000428299 555 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 TIMM9P3-201ENST00000428659 274 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 AC133104.1-201ENST00000429100 218 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 AC091390.1-201ENST00000433904 331 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 CKS1BP5-201ENST00000434172 273 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 AL136380.1-201ENST00000447970 162 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 AL691482.1-201ENST00000453255 87 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 SNORD121B-201ENST00000458838 81 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 RPS3AP41-201ENST00000462701 778 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 Vault.3-201ENST00000516676 95 ntBASIC4.72□□□□□ -1.65
CCM2LQ9NUG4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms