Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 HIGD1AP17-201ENST00000554576 276 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 OR4K7P-201ENST00000580232 945 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC025946.2-201ENST00000603398 234 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 Z99497.2-201ENST00000603634 310 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC069304.3-201ENST00000603938 1084 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC009220.3-201ENST00000604318 586 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC096553.1-201ENST00000605169 829 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 RNVU1-4-201ENST00000612985 164 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AL139418.1-201ENST00000613613 177 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC069209.1-201ENST00000619282 651 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AL603755.1-201ENST00000619504 163 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 U4.6-201ENST00000621618 127 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AL512506.2-201ENST00000624472 458 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC116618.1-201ENST00000634617 774 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 AC007671.2-201ENST00000637344 619 ntBASIC3.8□□□□□ -1.8
SIX2Q9NPC8 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX2Q9NPC8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 RNU6-1066P-201ENST00000363573 105 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 SUGT1P1-201ENST00000379514 476 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AL138878.1-201ENST00000405131 347 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 RPL23AP48-201ENST00000406913 488 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AL133264.1-201ENST00000407157 562 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 RNU2-42P-201ENST00000410697 113 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AMD1P2-201ENST00000412936 992 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 LUZP4P1-201ENST00000415420 344 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AL035423.1-201ENST00000420331 213 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AL593851.1-201ENST00000426171 157 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 MRPS18BP2-201ENST00000434310 759 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AL109741.2-201ENST00000455561 343 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 NF1P3-201ENST00000457709 450 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC010468.1-201ENST00000461022 817 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 RNU2-27P-201ENST00000516185 142 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AL356057.1-201ENST00000533798 831 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 ELOCP32-201ENST00000548625 324 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC020914.6-201ENST00000594327 272 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC008687.2-201ENST00000597865 520 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 VN1R82P-201ENST00000601481 356 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC106791.2-201ENST00000604680 391 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC080013.6-201ENST00000606185 215 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 RMST_8.1-201ENST00000610287 165 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AL392048.1-201ENST00000613946 534 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC009318.3-201ENST00000616916 503 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 OR8B1P-202ENST00000641132 1178 ntBASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIX2Q9NPC8 AP000526.1-201ENST00000603308 1388 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 AL445437.1-201ENST00000623157 3087 ntBASIC3.78□□□□□ -1.8
SIX2Q9NPC8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX2Q9NPC8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms