Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 AL445529.1-201ENST00000398713 389 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 RNA5SP274-201ENST00000410484 108 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 RPL26P37-201ENST00000411983 438 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 ELOCP11-201ENST00000436690 332 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 RPS7P5-201ENST00000441482 581 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 MTCO3P17-201ENST00000443775 513 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 ELOCP16-201ENST00000444494 332 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 AC023512.1-201ENST00000444513 499 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 RPL37P4-201ENST00000448908 268 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 HMGB1P5-202ENST00000451497 985 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 HMGB1P26-201ENST00000452520 628 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 RPL7P5-201ENST00000471472 736 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 RN7SKP234-201ENST00000517173 224 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 CENPUP2-201ENST00000555897 1186 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 AC115989.2-201ENST00000578640 563 ntBASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 RNA5SP189-201ENST00000364920 115 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 RNU6-185P-201ENST00000384421 107 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 RPL7P25-201ENST00000404151 721 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 AC007563.3-201ENST00000433233 371 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 RN7SL283P-201ENST00000489055 303 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 GTF2H2B-203ENST00000508065 1432 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 AC103783.1-201ENST00000520506 373 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 AL392112.1-201ENST00000605115 829 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 AC018754.1-201ENST00000607486 925 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 AC015726.3-201ENST00000624501 418 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 MIR622-201ENST00000638396 96 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 AC139713.2-210ENST00000641741 992 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 MAPK10-362ENST00000641864 4484 ntBASIC3.57□□□□□ -1.84
UPF3BQ9BZI7 MTND5P19-201ENST00000424872 1794 ntBASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 OR5H2-201ENST00000355273 945 ntBASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 MIR22-201ENST00000362190 85 ntBASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 SNORA44-201ENST00000384584 132 ntBASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 AC117440.1-201ENST00000474107 571 ntBASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 AP004217.1-201ENST00000480579 346 ntBASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 AC006445.1-201ENST00000491925 405 ntBASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 AC026801.2-201ENST00000515352 425 ntBASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 AC135803.1-201ENST00000608748 565 ntBASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 AL162574.2-201ENST00000614618 657 ntBASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 MTND5P3-201ENST00000438536 1800 ntBASIC3.56□□□□□ -1.84
UPF3BQ9BZI7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 OR5BR1P-201ENST00000524992 1330 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 RNA5SP295-201ENST00000362655 121 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 GSTA12P-201ENST00000402398 508 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 AL139281.1-201ENST00000422120 335 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 RPL35AP12-201ENST00000425362 338 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 RPS17P11-201ENST00000474297 293 ntBASIC3.55□□□□□ -1.84
UPF3BQ9BZI7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms