Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RAB9AP3-201ENST00000412737 573 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 MTND2P4-201ENST00000445034 1004 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 MTND1P29-201ENST00000448112 647 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 RAB9AP1-201ENST00000449393 573 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 PRSS3P4-201ENST00000453323 162 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AL136126.1-201ENST00000473603 402 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC104563.1-201ENST00000476147 376 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC112198.1-201ENST00000505369 1220 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 HSPE1P23-201ENST00000509838 286 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC010625.1-201ENST00000511296 403 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC024589.1-201ENST00000512207 263 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 TRMT10BP1-201ENST00000519377 943 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 OR4R3P-201ENST00000525084 838 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 LARP7P2-201ENST00000575306 125 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AP001004.1-201ENST00000582468 324 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 MTCYBP22-201ENST00000603788 447 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC090116.1-201ENST00000615679 446 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 LINC00901.1-201ENST00000617252 152 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC073968.1-201ENST00000618594 637 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC022106.2-201ENST00000620114 757 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 AC116667.1-201ENST00000604855 2072 ntBASIC5.09□□□□□ -1.59
RTFDC1Q9BY42 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
RTFDC1Q9BY42 NUP58P1-201ENST00000502546 1738 ntBASIC5.09□□□□□ -1.6
RTFDC1Q9BY42 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 OR52B1P-201ENST00000316506 909 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 SNORA63.1-201ENST00000362493 131 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 RNA5SP119-201ENST00000362715 117 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 RNU6-730P-201ENST00000383954 104 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 SNORD66.1-201ENST00000391230 76 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 RNU4-6P-201ENST00000410804 122 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 TPMTP2-201ENST00000414372 726 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 MTATP6P27-201ENST00000416987 621 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 MTCYBP24-201ENST00000420387 1106 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC129850.1-201ENST00000436203 508 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 RPL38P1-201ENST00000460914 211 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AL591473.1-201ENST00000464297 313 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 RPS29P19-201ENST00000479709 171 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 RPL5P23-201ENST00000496040 868 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 OR5H5P-201ENST00000503164 928 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 BNIP3P41-201ENST00000503774 571 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 PAICSP4-201ENST00000517543 1253 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC090151.1-201ENST00000520784 730 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AP003385.6-201ENST00000531603 374 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC135279.1-201ENST00000543493 504 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 PCMTD1P2-201ENST00000565017 355 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AP001180.3-201ENST00000582221 145 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC112187.2-201ENST00000604345 283 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC092354.1-201ENST00000606057 376 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC064807.4-201ENST00000607201 407 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC069200.1-201ENST00000609511 323 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 AC244100.1-202ENST00000621554 382 ntBASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTFDC1Q9BY42 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms