Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.97□□□□□ -1.77
SCAPERQ9BY12 AL442163.2-201ENST00000553912 710 ntBASIC3.97□□□□□ -1.77
SCAPERQ9BY12 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.97□□□□□ -1.77
SCAPERQ9BY12 AC008277.2-201ENST00000605196 797 ntBASIC3.97□□□□□ -1.77
SCAPERQ9BY12 AC090115.4-201ENST00000609970 188 ntBASIC3.97□□□□□ -1.77
SCAPERQ9BY12 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SCAPERQ9BY12 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.97□□□□□ -1.77
SCAPERQ9BY12 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCAPERQ9BY12 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SCAPERQ9BY12 AC006020.1-201ENST00000420179 1854 ntBASIC3.97□□□□□ -1.77
SCAPERQ9BY12 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
SCAPERQ9BY12 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
SCAPERQ9BY12 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
SCAPERQ9BY12 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SCAPERQ9BY12 RPS3AP26-201ENST00000398259 784 ntBASIC3.96□□□□□ -1.77
SCAPERQ9BY12 RPS29P6-201ENST00000438196 145 ntBASIC3.96□□□□□ -1.77
SCAPERQ9BY12 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SCAPERQ9BY12 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.96□□□□□ -1.77
SCAPERQ9BY12 AC017076.1-201ENST00000607613 578 ntBASIC3.96□□□□□ -1.77
SCAPERQ9BY12 MTND5P19-201ENST00000424872 1794 ntBASIC3.96□□□□□ -1.78
SCAPERQ9BY12 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCAPERQ9BY12 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 OR51A3P-201ENST00000413596 924 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 OR6K1P-201ENST00000456766 971 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 XIAPP3-201ENST00000312918 795 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 MIR27B-201ENST00000385129 97 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 AC004987.3-201ENST00000413879 771 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 RPLP0P7-201ENST00000416050 667 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 YPEL5P1-201ENST00000419731 367 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 AL591806.2-201ENST00000433122 173 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 AL138787.1-202ENST00000437804 898 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 FAM103A2P-201ENST00000444122 354 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 RPL9P32-201ENST00000464118 620 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 RPL21P18-201ENST00000469899 480 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 KLHL2P1-201ENST00000508691 521 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCAPERQ9BY12 DEFB122-202ENST00000569013 197 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 AC025754.2-201ENST00000606491 432 ntBASIC3.95□□□□□ -1.78
SCAPERQ9BY12 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCAPERQ9BY12 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCAPERQ9BY12 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCAPERQ9BY12 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCAPERQ9BY12 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SCAPERQ9BY12 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.94□□□□□ -1.78
SCAPERQ9BY12 USP9YP7-201ENST00000436723 430 ntBASIC3.94□□□□□ -1.78
SCAPERQ9BY12 USP9YP32-201ENST00000452432 430 ntBASIC3.94□□□□□ -1.78
SCAPERQ9BY12 AL645939.1-201ENST00000453429 797 ntBASIC3.94□□□□□ -1.78
SCAPERQ9BY12 CFTRP1-201ENST00000456646 183 ntBASIC3.94□□□□□ -1.78
SCAPERQ9BY12 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.94□□□□□ -1.78
SCAPERQ9BY12 RN7SKP24-201ENST00000515888 284 ntBASIC3.94□□□□□ -1.78
SCAPERQ9BY12 AC015712.3-201ENST00000559380 164 ntBASIC3.94□□□□□ -1.78
SCAPERQ9BY12 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.94□□□□□ -1.78
SCAPERQ9BY12 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCAPERQ9BY12 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
SCAPERQ9BY12 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.93□□□□□ -1.78
SCAPERQ9BY12 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCAPERQ9BY12 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCAPERQ9BY12 SDCBPP3-201ENST00000419629 891 ntBASIC3.93□□□□□ -1.78
SCAPERQ9BY12 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.93□□□□□ -1.78
SCAPERQ9BY12 SRIP2-201ENST00000428470 166 ntBASIC3.93□□□□□ -1.78
SCAPERQ9BY12 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.93□□□□□ -1.78
SCAPERQ9BY12 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SCAPERQ9BY12 NPM1P35-201ENST00000533043 868 ntBASIC3.93□□□□□ -1.78
SCAPERQ9BY12 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.93□□□□□ -1.78
SCAPERQ9BY12 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.93□□□□□ -1.78
SCAPERQ9BY12 SNORD114-30-201ENST00000364448 72 ntBASIC3.92□□□□□ -1.78
SCAPERQ9BY12 AL135786.1-201ENST00000415892 214 ntBASIC3.92□□□□□ -1.78
SCAPERQ9BY12 FCF1P1-201ENST00000432690 571 ntBASIC3.92□□□□□ -1.78
SCAPERQ9BY12 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.92□□□□□ -1.78
SCAPERQ9BY12 AC104058.1-201ENST00000448028 297 ntBASIC3.92□□□□□ -1.78
SCAPERQ9BY12 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.92□□□□□ -1.78
SCAPERQ9BY12 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.92□□□□□ -1.78
SCAPERQ9BY12 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.92□□□□□ -1.78
SCAPERQ9BY12 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.92□□□□□ -1.78
SCAPERQ9BY12 MIR4635-201ENST00000583759 79 ntBASIC3.92□□□□□ -1.78
SCAPERQ9BY12 AC010928.3-201ENST00000587712 541 ntBASIC3.92□□□□□ -1.78
SCAPERQ9BY12 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.92□□□□□ -1.78
SCAPERQ9BY12 AC078899.3-201ENST00000599065 212 ntBASIC3.92□□□□□ -1.78
SCAPERQ9BY12 AC007938.3-201ENST00000604965 623 ntBASIC3.92□□□□□ -1.78
SCAPERQ9BY12 Z99129.2-201ENST00000619967 314 ntBASIC3.92□□□□□ -1.78
SCAPERQ9BY12 U4.3-201ENST00000621047 82 ntBASIC3.92□□□□□ -1.78
SCAPERQ9BY12 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SCAPERQ9BY12 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SCAPERQ9BY12 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SCAPERQ9BY12 Z73965.1-201ENST00000623412 2297 ntBASIC3.91□□□□□ -1.78
SCAPERQ9BY12 RNU4-26P-201ENST00000410270 107 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms