Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 BMS1P19-201ENST00000433925 393 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 AL359265.2-201ENST00000434367 631 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.24□□□□□ -1.89
VGLL1Q99990 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.24□□□□□ -1.89
VGLL1Q99990 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 EIF4A1P11-201ENST00000451239 222 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 OR4G11P-201ENST00000492842 939 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 NDUFA5P12-201ENST00000503796 343 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 CDC42P4-201ENST00000510507 563 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 RNU6-488P-201ENST00000515918 99 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 AC239860.2-201ENST00000525886 270 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
VGLL1Q99990 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.24□□□□□ -1.89
VGLL1Q99990 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 AC074029.1-201ENST00000552531 1044 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 AGGF1P8-201ENST00000562979 1000 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 PCMTD1P2-201ENST00000565017 355 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.24□□□□□ -1.89
VGLL1Q99990 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.24□□□□□ -1.89
VGLL1Q99990 AC091489.2-201ENST00000566263 604 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.24□□□□□ -1.89
VGLL1Q99990 MIR4270-201ENST00000581799 70 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 RN7SL690P-201ENST00000582087 240 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.24□□□□□ -1.89
VGLL1Q99990 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.24□□□□□ -1.89
VGLL1Q99990 PSMA6P4-201ENST00000603247 718 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 NDUFA8P1-201ENST00000605525 367 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 AC012603.1-201ENST00000606424 528 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.24□□□□□ -1.89
VGLL1Q99990 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.24□□□□□ -1.89
VGLL1Q99990 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VGLL1Q99990 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VGLL1Q99990 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
VGLL1Q99990 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VGLL1Q99990 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VGLL1Q99990 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
VGLL1Q99990 MTND4P16-201ENST00000466108 1367 ntBASIC3.24□□□□□ -1.89
VGLL1Q99990 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
VGLL1Q99990 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.24□□□□□ -1.89
VGLL1Q99990 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VGLL1Q99990 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
VGLL1Q99990 GDI2P1-201ENST00000429312 1336 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VGLL1Q99990 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VGLL1Q99990 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
VGLL1Q99990 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VGLL1Q99990 RNU6-462P-201ENST00000362659 105 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 RN7SKP44-201ENST00000363602 316 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
VGLL1Q99990 RNU6-1122P-201ENST00000384449 107 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 AL078595.1-201ENST00000404458 226 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 RNA5SP306-201ENST00000411087 107 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 AC073264.1-201ENST00000411508 416 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.23□□□□□ -1.89
VGLL1Q99990 RPL6P29-201ENST00000414863 865 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VGLL1Q99990 AL139095.3-201ENST00000419672 1203 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VGLL1Q99990 RPL7AP25-201ENST00000423357 805 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VGLL1Q99990 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.23□□□□□ -1.89
VGLL1Q99990 AL360081.1-201ENST00000428299 555 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 BRWD1P3-201ENST00000428816 390 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 USP9YP9-201ENST00000429406 715 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 VDAC1P6-201ENST00000430062 855 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 ZYG11AP1-201ENST00000430329 837 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.23□□□□□ -1.89
VGLL1Q99990 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.23□□□□□ -1.89
VGLL1Q99990 AC006466.1-201ENST00000438721 289 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.23□□□□□ -1.89
VGLL1Q99990 MTCO1P14-201ENST00000441695 1559 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VGLL1Q99990 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.23□□□□□ -1.89
VGLL1Q99990 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.23□□□□□ -1.89
VGLL1Q99990 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.23□□□□□ -1.89
VGLL1Q99990 NPM1P49-201ENST00000448027 714 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 SSXP1-201ENST00000453640 473 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 AC091564.1-201ENST00000464563 479 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 RN7SL585P-201ENST00000470538 280 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 AC020593.1-201ENST00000507399 299 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.23□□□□□ -1.89
VGLL1Q99990 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.23□□□□□ -1.89
VGLL1Q99990 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.23□□□□□ -1.89
VGLL1Q99990 AC017037.1-201ENST00000508460 471 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VGLL1Q99990 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.23□□□□□ -1.89
VGLL1Q99990 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.23□□□□□ -1.89
VGLL1Q99990 SOD1P3-201ENST00000518682 454 ntBASIC3.23□□□□□ -1.89
VGLL1Q99990 DUXAP2-201ENST00000519198 589 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms