Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RNU6-976P-201ENST00000516086 111 ntBASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 HMGB1P19-201ENST00000517578 577 ntBASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AP001804.3-201ENST00000525146 880 ntBASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AC092490.3-201ENST00000545370 572 ntBASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 TVP23CP2-201ENST00000571473 623 ntBASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AC098848.2-201ENST00000588023 330 ntBASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AL157817.1-201ENST00000614264 790 ntBASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AP001784.1-201ENST00000624107 428 ntBASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 NAMPTP1-201ENST00000440465 2514 ntBASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SHKBP1Q8TBC3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AC097504.1-201ENST00000515103 2415 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 RNY1P12-201ENST00000364251 105 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 RNU4-7P-201ENST00000364758 141 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 RNU6-1013P-201ENST00000384180 107 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 RPL31P52-201ENST00000407532 367 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AL590609.2-201ENST00000421430 368 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AC018865.2-201ENST00000423631 129 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AC096644.2-201ENST00000429278 159 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AC119618.1-201ENST00000434191 222 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AC079781.2-201ENST00000446424 169 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AC021205.1-201ENST00000468797 348 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AC090602.1-201ENST00000469695 252 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 RN7SL188P-201ENST00000469842 285 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 EIF3KP3-201ENST00000514461 639 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 IGKV2D-10-201ENST00000520194 281 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 RN7SL356P-201ENST00000582228 248 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 MIR3942-201ENST00000585264 109 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AC011447.4-201ENST00000587562 111 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 PRR13P7-201ENST00000605538 430 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AL391813.2-201ENST00000609113 322 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 AL162373.1-201ENST00000620433 407 ntBASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHKBP1Q8TBC3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC025125.1-201ENST00000624743 1922 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 RNU1-146P-201ENST00000364015 165 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 U3.12-201ENST00000364498 214 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 RNU6-1062P-201ENST00000383908 107 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 Y_RNA.414-201ENST00000384011 101 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms