Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC093673.2-201ENST00000609674 331 ntBASIC1.78□□□□□ -2.13
CSMD3Q7Z407 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
CSMD3Q7Z407 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC1.78□□□□□ -2.13
CSMD3Q7Z407 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 RNU6-1159P-201ENST00000362933 107 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 MIR499A-201ENST00000384903 122 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AL023284.1-201ENST00000403956 276 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 RPLP0P7-201ENST00000416050 667 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 SRIP1-201ENST00000489235 288 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 RHEBP3-201ENST00000411920 351 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 RPL23AP36-201ENST00000413895 458 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AC245054.2-201ENST00000415639 319 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 VDAC1P3-201ENST00000434069 851 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 RPL23AP11-201ENST00000475260 469 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 RN7SL636P-201ENST00000497504 294 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 Y_RNA.670-201ENST00000516255 105 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AC023043.2-201ENST00000589678 1026 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AP003117.2-201ENST00000606010 545 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AC074140.1-201ENST00000621617 208 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AC006111.3-201ENST00000622137 383 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 RNU6-321P-201ENST00000410912 106 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AL513043.1-201ENST00000439124 535 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 OR6K1P-201ENST00000456766 971 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 TRBV1-201ENST00000476502 284 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 MIR2114-201ENST00000516645 80 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AP003385.6-201ENST00000531603 374 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 CKS1BP1-201ENST00000555221 240 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 NRBF2P1-201ENST00000587407 859 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 VN1R9P-201ENST00000614184 867 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 U7.8-201ENST00000619968 63 ntBASIC1.77□□□□□ -2.13
CSMD3Q7Z407 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 METTL8-218ENST00000638989 876 ntTSL 5 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 METTL8-219ENST00000640734 726 ntTSL 2 BASIC1.77□□□□□ -2.13
CSMD3Q7Z407 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AC093909.5-201ENST00000621839 1799 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AC112220.1-201ENST00000434628 355 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 SNORA25.9-201ENST00000365087 128 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 B3GALNT1P1-201ENST00000420569 975 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AL049610.1-201ENST00000423374 372 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 RN7SKP24-201ENST00000515888 284 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AC009570.1-201ENST00000609599 745 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AC008121.2-201ENST00000614647 523 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AC241377.1-201ENST00000619797 406 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 MTND5P6-201ENST00000422338 1798 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 MTND5P19-201ENST00000424872 1794 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AC087565.3-202ENST00000642085 1603 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AL138878.1-201ENST00000405131 347 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AC092013.1-201ENST00000438795 332 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 FABP5P12-201ENST00000515543 389 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 AC010928.3-201ENST00000587712 541 ntBASIC1.76□□□□□ -2.13
CSMD3Q7Z407 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CSMD3Q7Z407 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.75□□□□□ -2.13
CSMD3Q7Z407 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms