Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 GSTA9P-201ENST00000406231 611 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 TRIAP1P1-201ENST00000427062 225 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC108078.3-201ENST00000502633 489 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC006971.1-201ENST00000407916 4486 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 RPS20P5-201ENST00000434808 360 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 OR10AB1P-201ENST00000609613 938 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 NUP58P1-201ENST00000502546 1738 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC069528.2-201ENST00000624849 1991 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 RNU1-112P-201ENST00000364401 164 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 LINC01355-201ENST00000566551 5444 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AL031985.3-201ENST00000565390 2449 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 Z82209.1-201ENST00000422141 2135 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC017007.4-201ENST00000503353 1352 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AP002088.1-201ENST00000382740 395 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 NANOGP6-201ENST00000429190 847 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 DYNLL1P7-201ENST00000429273 258 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC005798.1-201ENST00000513715 387 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC006518.1-201ENST00000541449 943 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 PHKBP1-201ENST00000450951 1951 ntBASIC1.57□□□□□ -2.16
UBR4Q5T4S7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
UBR4Q5T4S7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AL137159.1-201ENST00000452808 512 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AC090602.1-201ENST00000469695 252 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 RNA5SP322-201ENST00000363617 119 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 RNU6-198P-201ENST00000384258 104 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 GLRXP1-201ENST00000423261 334 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 KATNBL1P3-201ENST00000443475 909 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 MTCO3P20-201ENST00000454926 688 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AC084357.1-201ENST00000473404 255 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 MIR1273G-201ENST00000577677 100 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AC092435.4-201ENST00000623012 4159 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AC010881.1-201ENST00000433830 235 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 YWHAQP9-201ENST00000445891 512 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 HMGN1P5-201ENST00000448591 263 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 TRBV26-201ENST00000456572 344 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 PRDX3P4-201ENST00000470828 747 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 RN7SL442P-201ENST00000473804 320 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 MIR3936-201ENST00000584304 110 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 MIR6845-201ENST00000613182 61 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AL031595.2-201ENST00000624215 19071 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 MTND5P23-201ENST00000430812 1655 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 SNORA31-201ENST00000362607 130 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 RNU1-57P-201ENST00000384491 166 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms