Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RPL21P18-201ENST00000469899 480 ntBASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 MTCO3P35-201ENST00000485582 781 ntBASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 AC112198.1-201ENST00000505369 1220 ntBASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 AC119751.5-201ENST00000514077 770 ntBASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 AC112206.4-201ENST00000515142 405 ntBASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 AC010735.1-201ENST00000567305 1026 ntBASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 SNRPGP15-201ENST00000600149 222 ntBASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 AC112503.2-201ENST00000609005 552 ntBASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 AC078880.5-201ENST00000617845 421 ntBASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHROOM1Q2M3G4 MFSD8-233ENST00000641482 4860 ntBASIC3.9□□□□□ -1.78
SHROOM1Q2M3G4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SHROOM1Q2M3G4 MTND5P28-201ENST00000438005 1594 ntBASIC3.9□□□□□ -1.78
SHROOM1Q2M3G4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SHROOM1Q2M3G4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 RNU1-89P-201ENST00000384592 164 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 GSTA8P-201ENST00000404253 637 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AC073310.1-201ENST00000423226 1033 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 ELOCP13-201ENST00000443934 329 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 HMGB3P8-201ENST00000449709 577 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 MRPL35P4-201ENST00000453682 566 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AC104108.1-201ENST00000509930 412 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 MTCO3P27-201ENST00000514397 196 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AP003355.1-201ENST00000518956 587 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 MTND5P21-201ENST00000531961 522 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 MIR4789-201ENST00000577469 82 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AL033523.1-201ENST00000605153 153 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AC021851.1-201ENST00000608537 1082 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AC006249.1-201ENST00000621223 471 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AP003400.6-201ENST00000624698 740 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 AL513302.2-201ENST00000562313 1842 ntBASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHROOM1Q2M3G4 SEC63P2-201ENST00000503863 1939 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 SNORD65C-201ENST00000390962 71 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AP002784.2-201ENST00000397300 549 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 USP9YP31-201ENST00000431405 881 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 MRPS18BP2-201ENST00000434310 759 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AC092170.1-201ENST00000440211 356 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 ATP5C1P1-201ENST00000441945 895 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 RPS26P56-201ENST00000444468 240 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AC126121.1-201ENST00000482313 553 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AC104629.1-201ENST00000494226 508 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 RNU5A-7P-201ENST00000515979 116 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 RNA5SP341-201ENST00000516261 117 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 HIGD1AP10-201ENST00000527837 282 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AC011611.5-201ENST00000552477 578 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 EIF4BP1-201ENST00000554881 351 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 MIR5047-201ENST00000579212 100 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 MIR4325-201ENST00000583049 90 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AC006254.3-201ENST00000603353 884 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 Z82195.1-201ENST00000604558 398 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms