Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.42□□□□□ -1.86
CDH4P55283 AC106730.3-201ENST00000624568 641 ntBASIC3.42□□□□□ -1.86
CDH4P55283 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.42□□□□□ -1.86
CDH4P55283 ZNF734P-201ENST00000419494 1534 ntBASIC3.42□□□□□ -1.86
CDH4P55283 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH4P55283 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH4P55283 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH4P55283 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.42□□□□□ -1.86
CDH4P55283 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDH4P55283 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDH4P55283 AL355578.1-201ENST00000607405 1328 ntBASIC3.42□□□□□ -1.86
CDH4P55283 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH4P55283 AC058791.1-201ENST00000608412 3198 ntBASIC3.41□□□□□ -1.86
CDH4P55283 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CDH4P55283 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDH4P55283 MIR208A-201ENST00000362287 71 ntBASIC3.41□□□□□ -1.86
CDH4P55283 U3.19-201ENST00000390893 196 ntBASIC3.41□□□□□ -1.86
CDH4P55283 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH4P55283 RNA5SP120-201ENST00000410900 112 ntBASIC3.41□□□□□ -1.86
CDH4P55283 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH4P55283 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC012065.2-201ENST00000421295 375 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC096632.1-201ENST00000427395 310 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC005300.1-201ENST00000428401 373 ntBASIC3.41□□□□□ -1.86
CDH4P55283 ATP5C1P1-201ENST00000441945 895 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH4P55283 RPL5P24-201ENST00000463742 885 ntBASIC3.41□□□□□ -1.86
CDH4P55283 CYCSP20-201ENST00000473154 315 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH4P55283 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.41□□□□□ -1.86
CDH4P55283 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH4P55283 RNU6-416P-201ENST00000516265 103 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH4P55283 HMGB1P1-201ENST00000522557 636 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH4P55283 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH4P55283 UBE2NP1-201ENST00000545592 458 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH4P55283 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.41□□□□□ -1.86
CDH4P55283 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH4P55283 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.41□□□□□ -1.86
CDH4P55283 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH4P55283 AL031985.2-201ENST00000600955 480 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC025588.3-201ENST00000604182 274 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC007179.3-201ENST00000604976 235 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC073657.2-201ENST00000605661 303 ntBASIC3.41□□□□□ -1.86
CDH4P55283 SNORD39.4-201ENST00000620099 78 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.41□□□□□ -1.86
CDH4P55283 AC091948.2-201ENST00000636510 279 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH4P55283 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.41□□□□□ -1.86
CDH4P55283 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CDH4P55283 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDH4P55283 AC093908.1-201ENST00000623125 8092 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC073055.1-201ENST00000456901 1621 ntBASIC3.41□□□□□ -1.86
CDH4P55283 AC007256.1-201ENST00000392253 2765 ntBASIC3.4□□□□□ -1.86
CDH4P55283 AP001350.1-201ENST00000601906 1524 ntBASIC3.4□□□□□ -1.86
CDH4P55283 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CDH4P55283 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH4P55283 RNU6-629P-201ENST00000384061 103 ntBASIC3.4□□□□□ -1.87
CDH4P55283 SFR1P1-201ENST00000403720 688 ntBASIC3.4□□□□□ -1.87
CDH4P55283 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH4P55283 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH4P55283 AL009174.1-201ENST00000426577 416 ntBASIC3.4□□□□□ -1.87
CDH4P55283 RPP40P1-201ENST00000426762 456 ntBASIC3.4□□□□□ -1.87
CDH4P55283 AC006946.1-201ENST00000429106 328 ntBASIC3.4□□□□□ -1.87
CDH4P55283 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH4P55283 MTND4P15-201ENST00000437913 1033 ntBASIC3.4□□□□□ -1.87
CDH4P55283 ELOCP13-201ENST00000443934 329 ntBASIC3.4□□□□□ -1.87
CDH4P55283 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH4P55283 RN7SL807P-201ENST00000470923 297 ntBASIC3.4□□□□□ -1.87
CDH4P55283 RPS4XP6-201ENST00000477670 797 ntBASIC3.4□□□□□ -1.87
CDH4P55283 AC021205.2-201ENST00000480069 347 ntBASIC3.4□□□□□ -1.87
CDH4P55283 AC021678.1-201ENST00000505195 936 ntBASIC3.4□□□□□ -1.87
CDH4P55283 AC110794.1-201ENST00000505816 425 ntBASIC3.4□□□□□ -1.87
CDH4P55283 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH4P55283 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH4P55283 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH4P55283 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH4P55283 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH4P55283 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
CDH4P55283 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CDH4P55283 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH4P55283 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH4P55283 SYF2P1-201ENST00000550658 413 ntBASIC3.4□□□□□ -1.87
CDH4P55283 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH4P55283 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH4P55283 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH4P55283 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH4P55283 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH4P55283 MIR4425-201ENST00000580572 84 ntBASIC3.4□□□□□ -1.87
CDH4P55283 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.4□□□□□ -1.87
CDH4P55283 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.4□□□□□ -1.87
CDH4P55283 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.4□□□□□ -1.87
CDH4P55283 CKS1BP3-201ENST00000600888 237 ntBASIC3.4□□□□□ -1.87
CDH4P55283 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.4□□□□□ -1.87
CDH4P55283 AC013468.1-201ENST00000608680 598 ntBASIC3.4□□□□□ -1.87
CDH4P55283 AL592295.2-201ENST00000612578 206 ntBASIC3.4□□□□□ -1.87
CDH4P55283 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CDH4P55283 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms