Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TVP23BP2-201ENST00000455082 615 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AC087312.1-201ENST00000471411 480 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 ACTG1P13-201ENST00000486987 1043 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 SUMO2P5-201ENST00000506790 245 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGCS2P54868 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGCS2P54868 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGCS2P54868 AC018797.3-201ENST00000513388 1241 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGCS2P54868 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGCS2P54868 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGCS2P54868 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HMGCS2P54868 AC027104.1-201ENST00000563702 681 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 MIR4738-201ENST00000579134 87 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AP000919.1-202ENST00000581139 1264 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGCS2P54868 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGCS2P54868 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGCS2P54868 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGCS2P54868 AP002802.2-201ENST00000605877 235 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AC018754.1-201ENST00000607486 925 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AC016597.2-201ENST00000613256 341 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AC084824.4-201ENST00000620106 731 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGCS2P54868 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGCS2P54868 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
HMGCS2P54868 MTCO1P14-201ENST00000441695 1559 ntBASIC3.7□□□□□ -1.82
HMGCS2P54868 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGCS2P54868 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGCS2P54868 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGCS2P54868 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGCS2P54868 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGCS2P54868 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HMGCS2P54868 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGCS2P54868 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGCS2P54868 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGCS2P54868 SNORA5B-201ENST00000363786 132 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 SNORA54-201ENST00000384281 123 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGCS2P54868 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGCS2P54868 RPL31P45-201ENST00000419532 356 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGCS2P54868 RPL23AP82-202ENST00000427528 469 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 AC011242.1-201ENST00000433596 1158 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGCS2P54868 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGCS2P54868 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGCS2P54868 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGCS2P54868 TPTE2P6-202ENST00000445572 1007 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 AL035407.2-201ENST00000454090 378 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 AC008280.2-201ENST00000455473 307 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 CENPBD1P1-201ENST00000464061 469 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
HMGCS2P54868 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGCS2P54868 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGCS2P54868 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGCS2P54868 PTP4A1P6-201ENST00000531034 478 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.69□□□□□ -1.82
HMGCS2P54868 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.69□□□□□ -1.82
HMGCS2P54868 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGCS2P54868 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGCS2P54868 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.69□□□□□ -1.82
HMGCS2P54868 AL606834.3-201ENST00000602615 496 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 AC096947.1-201ENST00000603233 470 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 PRELID3BP8-201ENST00000604148 295 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 IGHV3-29-201ENST00000604817 344 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGCS2P54868 uc_338.25-201ENST00000613756 156 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 AC004825.2-201ENST00000616634 455 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 AC099506.2-201ENST00000623074 221 ntBASIC3.69□□□□□ -1.82
HMGCS2P54868 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGCS2P54868 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGCS2P54868 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGCS2P54868 AC118273.1-201ENST00000525324 3006 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS2P54868 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS2P54868 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS2P54868 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HMGCS2P54868 RNU5B-1-201ENST00000363286 116 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 U6.112-201ENST00000384129 70 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGCS2P54868 FABP5P3-201ENST00000437960 408 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCS2P54868 AC068135.1-201ENST00000446164 246 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCS2P54868 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCS2P54868 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGCS2P54868 RPS4XP6-201ENST00000477670 797 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 PRELID3BP6-201ENST00000503839 571 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCS2P54868 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGCS2P54868 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCS2P54868 AC118942.1-201ENST00000529674 1035 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCS2P54868 AC010735.1-201ENST00000567305 1026 ntBASIC3.68□□□□□ -1.82
HMGCS2P54868 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCS2P54868 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms