Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF144AP50876 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
RNF144AP50876 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF144AP50876 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF144AP50876 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF144AP50876 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF144AP50876 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF144AP50876 AC108751.5-201ENST00000492880 1336 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 AC007842.1-201ENST00000597336 2039 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF144AP50876 Z95114.1-201ENST00000624264 14574 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
RNF144AP50876 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF144AP50876 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF144AP50876 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RNF144AP50876 AL121886.1-201ENST00000358609 435 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 RN7SKP184-201ENST00000362348 333 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 RNY3P11-201ENST00000364153 102 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 RNU4-50P-201ENST00000364361 141 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 RNU1-59P-201ENST00000364829 162 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
RNF144AP50876 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF144AP50876 RNU6-946P-201ENST00000383878 107 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 MIR517A-201ENST00000385001 87 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 RNA5SP198-201ENST00000410376 127 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 RNU2-14P-201ENST00000411053 191 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF144AP50876 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF144AP50876 AL389925.1-201ENST00000432257 728 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 NEFMP1-201ENST00000443423 1006 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 FCF1P4-201ENST00000448326 183 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 VPS25P1-201ENST00000455691 508 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF144AP50876 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
RNF144AP50876 RN7SL432P-201ENST00000484057 298 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 AC135721.1-201ENST00000497954 479 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 AC092436.3-201ENST00000511788 257 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 RNU6-897P-201ENST00000517135 105 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 AC116917.1-201ENST00000520558 305 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 AP001922.4-201ENST00000526967 290 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.81□□□□□ -1.48
RNF144AP50876 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF144AP50876 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.81□□□□□ -1.48
RNF144AP50876 AC023968.1-201ENST00000560719 475 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF144AP50876 RN7SL802P-201ENST00000577858 299 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.81□□□□□ -1.48
RNF144AP50876 AL451044.1-201ENST00000604867 238 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF144AP50876 U1.25-201ENST00000614085 162 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 AL589994.2-201ENST00000621124 579 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF144AP50876 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF144AP50876 AC005725.1-201ENST00000577346 2607 ntBASIC5.81□□□□□ -1.48
RNF144AP50876 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF144AP50876 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RNF144AP50876 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
RNF144AP50876 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF144AP50876 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
RNF144AP50876 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF144AP50876 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RNF144AP50876 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RNF144AP50876 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF144AP50876 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RNF144AP50876 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF144AP50876 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 EIF2AP4-201ENST00000424793 1781 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF144AP50876 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF144AP50876 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF144AP50876 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RNF144AP50876 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF144AP50876 RN7SKP115-201ENST00000363177 317 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 RNU6-1293P-201ENST00000384077 107 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 Y_RNA.539-201ENST00000384635 107 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 AL157702.1-201ENST00000398764 426 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 RPS4XP7-201ENST00000406274 780 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 CYP4F30P-202ENST00000420048 405 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF144AP50876 AL353997.1-201ENST00000432936 108 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 RPL35AP22-201ENST00000436855 335 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 AC004383.1-201ENST00000438135 289 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.8□□□□□ -1.48
RNF144AP50876 PPIAP3-201ENST00000450588 505 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 RN7SL221P-201ENST00000466190 281 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 AC094085.1-201ENST00000468914 584 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 RPS27AP1-201ENST00000475545 471 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 RN7SL369P-201ENST00000477138 299 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 RPL21P6-201ENST00000479171 504 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 RN7SL612P-201ENST00000497704 295 ntBASIC5.8□□□□□ -1.48
RNF144AP50876 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF144AP50876 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF144AP50876 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF144AP50876 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF144AP50876 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms