Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC027807.2-201ENST00000616099 408 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNGA1P29973 AL445567.2-201ENST00000618935 498 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNGA1P29973 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.24□□□□□ -1.57
CNGA1P29973 AL356121.2-201ENST00000624715 780 ntBASIC5.24□□□□□ -1.57
CNGA1P29973 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.24□□□□□ -1.57
CNGA1P29973 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNGA1P29973 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNGA1P29973 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.24□□□□□ -1.57
CNGA1P29973 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.24□□□□□ -1.57
CNGA1P29973 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CNGA1P29973 SCN1A-220ENST00000641603 12506 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNGA1P29973 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNGA1P29973 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNGA1P29973 AC021146.4-201ENST00000309229 279 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 AL161781.1-201ENST00000354277 403 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 RNU4-75P-201ENST00000364621 146 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 RNU5E-5P-201ENST00000365379 116 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNGA1P29973 RNU6-761P-201ENST00000384148 107 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 RNU2-15P-201ENST00000410692 191 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 CDK8P2-201ENST00000415020 547 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 AC127526.1-201ENST00000417526 366 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 ZNF885P-201ENST00000420174 1098 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CNGA1P29973 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.23□□□□□ -1.57
CNGA1P29973 AC096638.2-201ENST00000434965 711 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 MTCYBP45-201ENST00000435243 565 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.23□□□□□ -1.57
CNGA1P29973 AL445669.2-201ENST00000454425 421 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 DNAJC19P1-201ENST00000455312 319 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 BTF3P5-201ENST00000457252 467 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 RPS20P24-201ENST00000457473 361 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.23□□□□□ -1.57
CNGA1P29973 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.23□□□□□ -1.57
CNGA1P29973 RN7SL810P-201ENST00000493031 276 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.23□□□□□ -1.57
CNGA1P29973 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.23□□□□□ -1.57
CNGA1P29973 AC010625.1-201ENST00000511296 403 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CNGA1P29973 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.23□□□□□ -1.57
CNGA1P29973 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.23□□□□□ -1.57
CNGA1P29973 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.23□□□□□ -1.57
CNGA1P29973 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNGA1P29973 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.23□□□□□ -1.57
CNGA1P29973 AC034105.4-201ENST00000568304 277 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 AL355812.1-201ENST00000603215 216 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.23□□□□□ -1.57
CNGA1P29973 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.23□□□□□ -1.57
CNGA1P29973 NMD3P1-201ENST00000439704 1488 ntBASIC5.23□□□□□ -1.57
CNGA1P29973 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.23□□□□□ -1.57
CNGA1P29973 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CNGA1P29973 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CNGA1P29973 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.23□□□□□ -1.57
CNGA1P29973 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CNGA1P29973 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.23□□□□□ -1.57
CNGA1P29973 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.23□□□□□ -1.57
CNGA1P29973 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CNGA1P29973 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CNGA1P29973 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.22□□□□□ -1.57
CNGA1P29973 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.22□□□□□ -1.57
CNGA1P29973 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CNGA1P29973 AC092447.10-201ENST00000620607 1652 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
CNGA1P29973 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.22□□□□□ -1.57
CNGA1P29973 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.22□□□□□ -1.57
CNGA1P29973 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.22□□□□□ -1.57
CNGA1P29973 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CNGA1P29973 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CNGA1P29973 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.22□□□□□ -1.57
CNGA1P29973 OR5H15-201ENST00000383696 930 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 U3.35-201ENST00000408405 208 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 RNA5SP56-201ENST00000410277 118 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.22□□□□□ -1.57
CNGA1P29973 TMSB10P2-201ENST00000416049 131 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.22□□□□□ -1.57
CNGA1P29973 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.22□□□□□ -1.57
CNGA1P29973 E2F6P2-201ENST00000420708 748 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CNGA1P29973 AL513174.1-201ENST00000423182 629 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.22□□□□□ -1.57
CNGA1P29973 CKS1BP6-201ENST00000424932 240 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CNGA1P29973 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.22□□□□□ -1.57
CNGA1P29973 AL357520.1-201ENST00000441557 453 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.22□□□□□ -1.57
CNGA1P29973 SSXP1-201ENST00000453640 473 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 HMGB1P15-201ENST00000453854 435 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 SNORA84-201ENST00000459229 133 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.22□□□□□ -1.57
CNGA1P29973 RPL7P19-201ENST00000469948 618 ntBASIC5.22□□□□□ -1.57
CNGA1P29973 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.22□□□□□ -1.57
CNGA1P29973 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.22□□□□□ -1.57
CNGA1P29973 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.22□□□□□ -1.57
CNGA1P29973 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.22□□□□□ -1.57
CNGA1P29973 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms