Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 MIR142-201ENST00000384835 87 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 RPL31P1-201ENST00000398116 372 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 AL353692.2-201ENST00000407054 335 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 AL389915.1-201ENST00000422463 466 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CTLA4P16410 RPL23AP69-201ENST00000431134 458 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 ZNF965P-201ENST00000432501 817 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 AC092685.1-201ENST00000447960 1243 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 SSXP4-201ENST00000451349 245 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 ARPC3P2-201ENST00000457786 533 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.67□□□□□ -1.98
CTLA4P16410 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.67□□□□□ -1.98
CTLA4P16410 RN7SL504P-201ENST00000494496 287 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.67□□□□□ -1.98
CTLA4P16410 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CTLA4P16410 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.67□□□□□ -1.98
CTLA4P16410 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.67□□□□□ -1.98
CTLA4P16410 RN7SKP283-201ENST00000517197 270 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.67□□□□□ -1.98
CTLA4P16410 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.67□□□□□ -1.98
CTLA4P16410 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.67□□□□□ -1.98
CTLA4P16410 AC104115.2-201ENST00000523026 687 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 AP001207.1-201ENST00000524051 481 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.67□□□□□ -1.98
CTLA4P16410 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.67□□□□□ -1.98
CTLA4P16410 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.67□□□□□ -1.98
CTLA4P16410 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.67□□□□□ -1.98
CTLA4P16410 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.67□□□□□ -1.98
CTLA4P16410 MIR5004-201ENST00000579078 107 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.67□□□□□ -1.98
CTLA4P16410 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.67□□□□□ -1.98
CTLA4P16410 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.67□□□□□ -1.98
CTLA4P16410 AC018618.2-201ENST00000604770 446 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 AC069200.1-201ENST00000609511 323 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.67□□□□□ -1.98
CTLA4P16410 AC025016.1-201ENST00000616746 682 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 AC244100.1-202ENST00000621554 382 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 SNORA50A-202ENST00000629536 136 ntBASIC2.67□□□□□ -1.98
CTLA4P16410 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CTLA4P16410 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CTLA4P16410 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CTLA4P16410 MTND5P19-201ENST00000424872 1794 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 SNORA63.1-201ENST00000362493 131 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 SNORD115-48-201ENST00000364764 76 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 SNORD51.1-201ENST00000365405 77 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 MIR23B-201ENST00000384832 97 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 MIR34B-201ENST00000385076 84 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 SNORA48.8-201ENST00000391324 134 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 PRRC2CP1-201ENST00000404428 159 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.66□□□□□ -1.98
CTLA4P16410 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.66□□□□□ -1.98
CTLA4P16410 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CTLA4P16410 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.66□□□□□ -1.98
CTLA4P16410 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.66□□□□□ -1.98
CTLA4P16410 AC104308.1-201ENST00000454621 333 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 RPL21P41-201ENST00000459863 264 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 RPS17P11-201ENST00000474297 293 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.66□□□□□ -1.98
CTLA4P16410 MTCO3P35-201ENST00000485582 781 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.66□□□□□ -1.98
CTLA4P16410 AL358832.1-201ENST00000497800 389 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.66□□□□□ -1.98
CTLA4P16410 RNA5SP380-201ENST00000517190 98 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CTLA4P16410 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CTLA4P16410 AL163153.1-201ENST00000554223 283 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 AL845331.3-202ENST00000562856 261 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 AC053481.3-201ENST00000577881 843 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.66□□□□□ -1.98
CTLA4P16410 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.66□□□□□ -1.98
CTLA4P16410 IGHV3-29-201ENST00000604817 344 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 AC079610.2-201ENST00000604818 690 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 AL162574.2-201ENST00000614618 657 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.66□□□□□ -1.98
CTLA4P16410 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.66□□□□□ -1.98
CTLA4P16410 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.66□□□□□ -1.98
CTLA4P16410 AC139713.2-210ENST00000641741 992 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CTLA4P16410 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CTLA4P16410 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.66□□□□□ -1.98
CTLA4P16410 AC093010.3-201ENST00000570269 15214 ntBASIC2.66□□□□□ -1.98
CTLA4P16410 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.66□□□□□ -1.98
CTLA4P16410 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CTLA4P16410 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.65□□□□□ -1.98
CTLA4P16410 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CTLA4P16410 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CTLA4P16410 AC002546.1-201ENST00000588041 2504 ntBASIC2.65□□□□□ -1.99
CTLA4P16410 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CTLA4P16410 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CTLA4P16410 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
CTLA4P16410 TAF9BP2-201ENST00000400856 499 ntBASIC2.65□□□□□ -1.99
CTLA4P16410 RNU2-17P-201ENST00000410290 190 ntBASIC2.65□□□□□ -1.99
CTLA4P16410 RPL7P8-201ENST00000411964 730 ntBASIC2.65□□□□□ -1.99
CTLA4P16410 VTA1P1-201ENST00000414044 866 ntBASIC2.65□□□□□ -1.99
CTLA4P16410 RPL21P66-201ENST00000426566 466 ntBASIC2.65□□□□□ -1.99
CTLA4P16410 MTND4LP14-201ENST00000429447 288 ntBASIC2.65□□□□□ -1.99
CTLA4P16410 TRIM60P13-201ENST00000432350 1283 ntBASIC2.65□□□□□ -1.99
CTLA4P16410 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms