Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 BTF3P4-201ENST00000418852 495 ntBASIC2.6□□□□□ -1.99
VCANP13611 ARL2BPP6-201ENST00000512757 439 ntBASIC2.6□□□□□ -1.99
VCANP13611 AC026464.5-201ENST00000562497 722 ntBASIC2.6□□□□□ -1.99
VCANP13611 AC005296.1-201ENST00000616145 209 ntBASIC2.6□□□□□ -1.99
VCANP13611 AC079298.2-201ENST00000623885 459 ntBASIC2.6□□□□□ -1.99
VCANP13611 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VCANP13611 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VCANP13611 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC2.6□□□□□ -1.99
VCANP13611 MTND5P29-201ENST00000458676 1807 ntBASIC2.6□□□□□ -1.99
VCANP13611 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
VCANP13611 U3.11-201ENST00000364476 212 ntBASIC2.6□□□□□ -1.99
VCANP13611 RPL30P2-201ENST00000414021 291 ntBASIC2.6□□□□□ -1.99
VCANP13611 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.6□□□□□ -1.99
VCANP13611 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.6□□□□□ -1.99
VCANP13611 ST13P14-201ENST00000474095 734 ntBASIC2.6□□□□□ -1.99
VCANP13611 AC126177.3-201ENST00000551839 688 ntBASIC2.6□□□□□ -1.99
VCANP13611 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.6□□□□□ -1.99
VCANP13611 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
VCANP13611 TVP23BP2-201ENST00000455082 615 ntBASIC2.59□□□□□ -1.99
VCANP13611 MTCO3P11-201ENST00000455103 774 ntBASIC2.59□□□□□ -1.99
VCANP13611 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.59□□□□□ -1.99
VCANP13611 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.59□□□□□ -1.99
VCANP13611 AC112673.1-201ENST00000513168 575 ntBASIC2.59□□□□□ -1.99
VCANP13611 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.59□□□□□ -1.99
VCANP13611 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.59□□□□□ -1.99
VCANP13611 OR1AB1P-201ENST00000585564 761 ntBASIC2.59□□□□□ -1.99
VCANP13611 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC2.59□□□□□ -1.99
VCANP13611 RMST_2.1-201ENST00000617263 136 ntBASIC2.59□□□□□ -1.99
VCANP13611 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.59□□□□□ -1.99
VCANP13611 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VCANP13611 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
VCANP13611 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.59□□□□□ -2
VCANP13611 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.59□□□□□ -2
VCANP13611 RN7SKP32-201ENST00000410167 303 ntBASIC2.59□□□□□ -2
VCANP13611 RNU6-1140P-201ENST00000410517 106 ntBASIC2.59□□□□□ -2
VCANP13611 RPS26P40-201ENST00000435209 294 ntBASIC2.59□□□□□ -2
VCANP13611 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.59□□□□□ -2
VCANP13611 RPL23AP49-201ENST00000492925 468 ntBASIC2.59□□□□□ -2
VCANP13611 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.59□□□□□ -2
VCANP13611 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.59□□□□□ -2
VCANP13611 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.59□□□□□ -2
VCANP13611 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
VCANP13611 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.59□□□□□ -2
VCANP13611 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC2.59□□□□□ -2
VCANP13611 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VCANP13611 AC112220.1-201ENST00000434628 355 ntBASIC2.58□□□□□ -2
VCANP13611 AC093392.2-201ENST00000450682 337 ntBASIC2.58□□□□□ -2
VCANP13611 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC2.58□□□□□ -2
VCANP13611 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.58□□□□□ -2
VCANP13611 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.58□□□□□ -2
VCANP13611 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.58□□□□□ -2
VCANP13611 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.58□□□□□ -2
VCANP13611 AP001521.1-201ENST00000609150 300 ntBASIC2.58□□□□□ -2
VCANP13611 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VCANP13611 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.58□□□□□ -2
VCANP13611 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
VCANP13611 EI24P2-201ENST00000397776 1076 ntBASIC2.58□□□□□ -2
VCANP13611 YPEL5P1-201ENST00000419731 367 ntBASIC2.58□□□□□ -2
VCANP13611 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC2.58□□□□□ -2
VCANP13611 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VCANP13611 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
VCANP13611 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC2.58□□□□□ -2
VCANP13611 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
VCANP13611 U3.6-201ENST00000363622 211 ntBASIC2.58□□□□□ -2
VCANP13611 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.58□□□□□ -2
VCANP13611 RPS7P13-201ENST00000413955 498 ntBASIC2.58□□□□□ -2
VCANP13611 AL035551.1-201ENST00000446931 348 ntBASIC2.58□□□□□ -2
VCANP13611 AP000893.1-201ENST00000474462 794 ntBASIC2.58□□□□□ -2
VCANP13611 AC096725.1-201ENST00000514266 313 ntBASIC2.58□□□□□ -2
VCANP13611 MIR2276-201ENST00000516886 89 ntBASIC2.58□□□□□ -2
VCANP13611 AC002984.1-201ENST00000591692 448 ntBASIC2.58□□□□□ -2
VCANP13611 AC091046.2-201ENST00000620775 665 ntBASIC2.58□□□□□ -2
VCANP13611 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VCANP13611 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.57□□□□□ -2
VCANP13611 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.57□□□□□ -2
VCANP13611 RPL21P134-201ENST00000453468 483 ntBASIC2.57□□□□□ -2
VCANP13611 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.57□□□□□ -2
VCANP13611 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.57□□□□□ -2
VCANP13611 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
VCANP13611 AP004372.1-201ENST00000604842 844 ntBASIC2.57□□□□□ -2
VCANP13611 AC008277.2-201ENST00000605196 797 ntBASIC2.57□□□□□ -2
VCANP13611 AL162233.1-201ENST00000620014 944 ntBASIC2.57□□□□□ -2
VCANP13611 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
VCANP13611 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VCANP13611 SNORD62.1-201ENST00000362541 86 ntBASIC2.57□□□□□ -2
VCANP13611 RNU2-2P-201ENST00000410396 191 ntBASIC2.57□□□□□ -2
VCANP13611 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.57□□□□□ -2
VCANP13611 RPL7P54-201ENST00000438336 674 ntBASIC2.57□□□□□ -2
VCANP13611 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.57□□□□□ -2
VCANP13611 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.57□□□□□ -2
VCANP13611 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.57□□□□□ -2
VCANP13611 AP001542.2-201ENST00000593141 364 ntBASIC2.57□□□□□ -2
VCANP13611 U2.15-201ENST00000611544 191 ntBASIC2.57□□□□□ -2
VCANP13611 U2.16-201ENST00000613119 191 ntBASIC2.57□□□□□ -2
VCANP13611 U2.12-201ENST00000613778 191 ntBASIC2.57□□□□□ -2
VCANP13611 U2.20-201ENST00000613956 192 ntBASIC2.57□□□□□ -2
VCANP13611 U2.9-201ENST00000615427 191 ntBASIC2.57□□□□□ -2
VCANP13611 U2.11-201ENST00000616345 191 ntBASIC2.57□□□□□ -2
VCANP13611 U2.2-201ENST00000616535 191 ntBASIC2.57□□□□□ -2
VCANP13611 U2.3-201ENST00000617785 191 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms