Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
HLA-DOAP06340 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.9□□□□□ -1.62
HLA-DOAP06340 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DOAP06340 RNU6-1042P-201ENST00000384204 107 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DOAP06340 HSPE1P12-201ENST00000412576 301 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC234782.4-201ENST00000417646 1048 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 MTCO2P19-201ENST00000427513 598 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 MTCO3P21-201ENST00000430791 643 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 RPL12P18-201ENST00000437175 325 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC006011.1-201ENST00000442758 349 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC003071.1-201ENST00000451219 789 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 MTCO3P11-201ENST00000455103 774 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 KLF3P2-201ENST00000465138 268 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 RN7SL132P-201ENST00000478131 296 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC110792.1-201ENST00000491826 472 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 MTCYBP17-201ENST00000503579 789 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 HIGD1AP6-201ENST00000521833 279 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC115085.1-201ENST00000588924 229 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC027807.2-201ENST00000616099 408 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 CDRT1-208ENST00000630868 794 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 OR5AK4P-201ENST00000635912 903 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DOAP06340 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DOAP06340 AC073544.1-201ENST00000600110 1595 ntBASIC4.9□□□□□ -1.63
HLA-DOAP06340 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DOAP06340 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DOAP06340 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HLA-DOAP06340 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.9□□□□□ -1.63
HLA-DOAP06340 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DOAP06340 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DOAP06340 SNORA60-201ENST00000362396 134 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 RNU5F-6P-201ENST00000362979 116 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 SNORD115-47-201ENST00000391226 86 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 RPL32P23-201ENST00000397237 405 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 RNU4-6P-201ENST00000410804 122 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 FCF1P2-201ENST00000415284 583 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 AC009237.2-201ENST00000421358 284 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 ELOCP10-201ENST00000440624 327 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DOAP06340 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DOAP06340 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 FGF7P6-202ENST00000451282 293 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 RPL36AP13-201ENST00000457490 317 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 AC004924.1-201ENST00000480160 781 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 AL358832.1-201ENST00000497800 389 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 HMGB1P28-201ENST00000507778 552 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DOAP06340 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 AC008562.1-201ENST00000521763 330 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 AF279873.1-201ENST00000523393 313 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 AC063950.1-201ENST00000552036 308 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 PCMTD1P2-201ENST00000565017 355 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 MIR3936-201ENST00000584304 110 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.89□□□□□ -1.63
HLA-DOAP06340 AL606490.9-201ENST00000603331 271 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 ELOCP34-201ENST00000604436 327 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 AC007014.2-201ENST00000615581 479 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DOAP06340 AC006484.1-201ENST00000435086 1884 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DOAP06340 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HLA-DOAP06340 ZNF37BP-203ENST00000452306 1352 ntBASIC4.89□□□□□ -1.63
HLA-DOAP06340 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DOAP06340 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DOAP06340 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms