Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RN7SL20P-201ENST00000488827 297 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AC093591.1-201ENST00000491435 481 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 RPL21P129-201ENST00000491732 478 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 RPL21P16-201ENST00000495531 483 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AC096751.1-202ENST00000502691 1067 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.59□□□□□ -1.99
SSNA1O43805 HSPD1P15-201ENST00000505573 1122 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.59□□□□□ -1.99
SSNA1O43805 AC007991.1-201ENST00000522680 631 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AC083923.1-201ENST00000523708 376 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.59□□□□□ -1.99
SSNA1O43805 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.59□□□□□ -1.99
SSNA1O43805 AC107016.2-201ENST00000547968 190 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AC137768.1-201ENST00000549998 553 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.59□□□□□ -1.99
SSNA1O43805 DNAJC8P1-201ENST00000554535 372 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AL391156.1-201ENST00000554965 554 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.59□□□□□ -1.99
SSNA1O43805 AC023575.1-201ENST00000580510 358 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.59□□□□□ -1.99
SSNA1O43805 AC125494.3-201ENST00000602759 455 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 AL162574.2-201ENST00000614618 657 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 STMN1P1-201ENST00000617809 440 ntBASIC2.59□□□□□ -1.99
SSNA1O43805 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SSNA1O43805 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SSNA1O43805 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.59□□□□□ -2
SSNA1O43805 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.59□□□□□ -2
SSNA1O43805 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.59□□□□□ -2
SSNA1O43805 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.59□□□□□ -2
SSNA1O43805 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.58□□□□□ -2
SSNA1O43805 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SSNA1O43805 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.58□□□□□ -2
SSNA1O43805 RNU6-799P-201ENST00000363567 107 ntBASIC2.58□□□□□ -2
SSNA1O43805 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.58□□□□□ -2
SSNA1O43805 AC092745.2-202ENST00000411880 369 ntBASIC2.58□□□□□ -2
SSNA1O43805 AL096701.2-201ENST00000416920 238 ntBASIC2.58□□□□□ -2
SSNA1O43805 AC008280.1-201ENST00000418851 412 ntBASIC2.58□□□□□ -2
SSNA1O43805 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SSNA1O43805 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.58□□□□□ -2
SSNA1O43805 RPL36AP6-201ENST00000435770 321 ntBASIC2.58□□□□□ -2
SSNA1O43805 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.58□□□□□ -2
SSNA1O43805 AC108734.1-201ENST00000439549 399 ntBASIC2.58□□□□□ -2
SSNA1O43805 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.58□□□□□ -2
SSNA1O43805 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.58□□□□□ -2
SSNA1O43805 UBBP3-201ENST00000445497 241 ntBASIC2.58□□□□□ -2
SSNA1O43805 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.58□□□□□ -2
SSNA1O43805 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SSNA1O43805 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.58□□□□□ -2
SSNA1O43805 TPT1P3-201ENST00000492841 512 ntBASIC2.58□□□□□ -2
SSNA1O43805 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSNA1O43805 RNU6-488P-201ENST00000515918 99 ntBASIC2.58□□□□□ -2
SSNA1O43805 RNU6-760P-201ENST00000516078 97 ntBASIC2.58□□□□□ -2
SSNA1O43805 OR4A45P-201ENST00000529954 901 ntBASIC2.58□□□□□ -2
SSNA1O43805 SNRPGP16-201ENST00000533275 226 ntBASIC2.58□□□□□ -2
SSNA1O43805 HSPE1P20-201ENST00000538133 289 ntBASIC2.58□□□□□ -2
SSNA1O43805 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.58□□□□□ -2
SSNA1O43805 AC093014.1-201ENST00000548926 724 ntBASIC2.58□□□□□ -2
SSNA1O43805 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.58□□□□□ -2
SSNA1O43805 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.58□□□□□ -2
SSNA1O43805 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.58□□□□□ -2
SSNA1O43805 AC051619.2-201ENST00000559063 397 ntBASIC2.58□□□□□ -2
SSNA1O43805 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.58□□□□□ -2
SSNA1O43805 AC024595.1-201ENST00000623088 387 ntBASIC2.58□□□□□ -2
SSNA1O43805 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.58□□□□□ -2
SSNA1O43805 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
SSNA1O43805 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.58□□□□□ -2
SSNA1O43805 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SSNA1O43805 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SSNA1O43805 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.58□□□□□ -2
SSNA1O43805 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SSNA1O43805 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.57□□□□□ -2
SSNA1O43805 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SSNA1O43805 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
SSNA1O43805 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SSNA1O43805 MIR192-201ENST00000384915 110 ntBASIC2.57□□□□□ -2
SSNA1O43805 RNU2-17P-201ENST00000410290 190 ntBASIC2.57□□□□□ -2
SSNA1O43805 AL139128.1-201ENST00000413921 941 ntBASIC2.57□□□□□ -2
SSNA1O43805 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.57□□□□□ -2
SSNA1O43805 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.57□□□□□ -2
SSNA1O43805 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.57□□□□□ -2
SSNA1O43805 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.57□□□□□ -2
SSNA1O43805 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.57□□□□□ -2
SSNA1O43805 RPS17P11-201ENST00000474297 293 ntBASIC2.57□□□□□ -2
SSNA1O43805 RPL9P33-201ENST00000484311 566 ntBASIC2.57□□□□□ -2
SSNA1O43805 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SSNA1O43805 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.57□□□□□ -2
SSNA1O43805 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.57□□□□□ -2
SSNA1O43805 SNORA31.8-201ENST00000516327 108 ntBASIC2.57□□□□□ -2
SSNA1O43805 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.57□□□□□ -2
SSNA1O43805 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.57□□□□□ -2
SSNA1O43805 AC025884.1-201ENST00000556034 378 ntBASIC2.57□□□□□ -2
SSNA1O43805 HSPE1P5-201ENST00000561489 272 ntBASIC2.57□□□□□ -2
SSNA1O43805 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.57□□□□□ -2
SSNA1O43805 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.57□□□□□ -2
SSNA1O43805 ZNF415P1-201ENST00000582279 1166 ntBASIC2.57□□□□□ -2
SSNA1O43805 MIR3939-201ENST00000582614 106 ntBASIC2.57□□□□□ -2
SSNA1O43805 OR7E18P-201ENST00000592589 702 ntBASIC2.57□□□□□ -2
SSNA1O43805 DPRXP5-201ENST00000604662 539 ntBASIC2.57□□□□□ -2
SSNA1O43805 AL513477.2-201ENST00000607858 568 ntBASIC2.57□□□□□ -2
SSNA1O43805 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms