Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
MSH5O43196 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC9.97□□□□□ -0.81
MSH5O43196 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MSH5O43196 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
MSH5O43196 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC9.97□□□□□ -0.81
MSH5O43196 RNA5SP79-201ENST00000365193 109 ntBASIC9.97□□□□□ -0.81
MSH5O43196 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
MSH5O43196 AL353151.1-201ENST00000402406 604 ntBASIC9.97□□□□□ -0.81
MSH5O43196 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC9.97□□□□□ -0.81
MSH5O43196 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC9.97□□□□□ -0.81
MSH5O43196 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
MSH5O43196 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
MSH5O43196 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC9.97□□□□□ -0.81
MSH5O43196 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC9.97□□□□□ -0.81
MSH5O43196 AL136139.1-201ENST00000605568 222 ntBASIC9.97□□□□□ -0.81
MSH5O43196 5S_rRNA.20-201ENST00000612104 118 ntBASIC9.97□□□□□ -0.81
MSH5O43196 AL161931.1-201ENST00000612768 246 ntBASIC9.97□□□□□ -0.81
MSH5O43196 ACACA-232ENST00000614438 569 ntTSL 2 BASIC9.97□□□□□ -0.81
MSH5O43196 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
MSH5O43196 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
MSH5O43196 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
MSH5O43196 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MSH5O43196 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
MSH5O43196 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MSH5O43196 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC9.97□□□□□ -0.81
MSH5O43196 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
MSH5O43196 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC9.96□□□□□ -0.81
MSH5O43196 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC9.96□□□□□ -0.81
MSH5O43196 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
MSH5O43196 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
MSH5O43196 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
MSH5O43196 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC9.96□□□□□ -0.81
MSH5O43196 AC007938.1-201ENST00000562524 2902 ntBASIC9.96□□□□□ -0.81
MSH5O43196 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC9.96□□□□□ -0.82
MSH5O43196 PTMAP8-201ENST00000397729 342 ntBASIC9.96□□□□□ -0.82
MSH5O43196 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC9.96□□□□□ -0.82
MSH5O43196 AC007560.1-201ENST00000426912 237 ntBASIC9.96□□□□□ -0.82
MSH5O43196 AL135790.2-201ENST00000437701 267 ntBASIC9.96□□□□□ -0.82
MSH5O43196 AL356133.1-201ENST00000444762 372 ntBASIC9.96□□□□□ -0.82
MSH5O43196 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC9.96□□□□□ -0.82
MSH5O43196 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC9.96□□□□□ -0.82
MSH5O43196 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
MSH5O43196 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC9.96□□□□□ -0.82
MSH5O43196 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC9.96□□□□□ -0.82
MSH5O43196 OR1F2P-201ENST00000570470 933 ntBASIC9.96□□□□□ -0.82
MSH5O43196 MIR4782-201ENST00000577987 79 ntBASIC9.96□□□□□ -0.82
MSH5O43196 AC131055.1-201ENST00000584626 316 ntBASIC9.96□□□□□ -0.82
MSH5O43196 AC119403.2-201ENST00000590960 598 ntBASIC9.96□□□□□ -0.82
MSH5O43196 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC9.96□□□□□ -0.82
MSH5O43196 SNORD91B-202ENST00000608459 222 ntBASIC9.96□□□□□ -0.82
MSH5O43196 AC089999.3-201ENST00000622440 577 ntBASIC9.96□□□□□ -0.82
MSH5O43196 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC9.96□□□□□ -0.82
MSH5O43196 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
MSH5O43196 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
MSH5O43196 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
MSH5O43196 LRRC37A17P-201ENST00000570311 4693 ntBASIC9.96□□□□□ -0.82
MSH5O43196 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC9.96□□□□□ -0.82
MSH5O43196 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
MSH5O43196 OFD1P17-201ENST00000437639 3018 ntBASIC9.96□□□□□ -0.82
MSH5O43196 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
MSH5O43196 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
MSH5O43196 AP001284.1-201ENST00000528393 2118 ntBASIC9.95□□□□□ -0.82
MSH5O43196 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
MSH5O43196 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
MSH5O43196 AL159152.1-201ENST00000635019 2587 ntBASIC9.95□□□□□ -0.82
MSH5O43196 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC9.95□□□□□ -0.82
MSH5O43196 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
MSH5O43196 RNU6-418P-201ENST00000384035 107 ntBASIC9.95□□□□□ -0.82
MSH5O43196 AC007679.3-201ENST00000434035 414 ntBASIC9.95□□□□□ -0.82
MSH5O43196 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC9.95□□□□□ -0.82
MSH5O43196 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC9.95□□□□□ -0.82
MSH5O43196 AC022254.1-201ENST00000567857 235 ntBASIC9.95□□□□□ -0.82
MSH5O43196 AC007229.1-201ENST00000590455 412 ntBASIC9.95□□□□□ -0.82
MSH5O43196 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC9.95□□□□□ -0.82
MSH5O43196 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC9.95□□□□□ -0.82
MSH5O43196 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
MSH5O43196 ARHGAP42P4-201ENST00000549782 2934 ntBASIC9.95□□□□□ -0.82
MSH5O43196 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
MSH5O43196 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
MSH5O43196 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC9.94□□□□□ -0.82
MSH5O43196 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC9.94□□□□□ -0.82
MSH5O43196 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC9.94□□□□□ -0.82
MSH5O43196 RNVU1-15-201ENST00000384476 165 ntBASIC9.94□□□□□ -0.82
MSH5O43196 RNU11-4P-201ENST00000391149 133 ntBASIC9.94□□□□□ -0.82
MSH5O43196 BTF3L4P2-201ENST00000392798 346 ntBASIC9.94□□□□□ -0.82
MSH5O43196 AC090114.1-201ENST00000393266 448 ntBASIC9.94□□□□□ -0.82
MSH5O43196 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
MSH5O43196 AL355497.1-201ENST00000406262 551 ntBASIC9.94□□□□□ -0.82
MSH5O43196 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC9.94□□□□□ -0.82
MSH5O43196 SOD1P1-201ENST00000407803 440 ntBASIC9.94□□□□□ -0.82
MSH5O43196 YPEL5P1-201ENST00000419731 367 ntBASIC9.94□□□□□ -0.82
MSH5O43196 AC009362.1-201ENST00000427253 406 ntBASIC9.94□□□□□ -0.82
MSH5O43196 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC9.94□□□□□ -0.82
MSH5O43196 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC9.94□□□□□ -0.82
MSH5O43196 AC117395.2-201ENST00000463122 1128 ntBASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms