Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SKINT1L-201ENST00000401057 817 ntBASIC4.88□□□□□ -1.63
CUX2O14529 RN7SKP285-201ENST00000410137 318 ntBASIC4.88□□□□□ -1.63
CUX2O14529 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.88□□□□□ -1.63
CUX2O14529 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.88□□□□□ -1.63
CUX2O14529 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.88□□□□□ -1.63
CUX2O14529 RNU6-775P-201ENST00000459318 96 ntBASIC4.88□□□□□ -1.63
CUX2O14529 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.88□□□□□ -1.63
CUX2O14529 AC108729.3-201ENST00000513484 108 ntBASIC4.88□□□□□ -1.63
CUX2O14529 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.88□□□□□ -1.63
CUX2O14529 AP003117.2-201ENST00000606010 545 ntBASIC4.88□□□□□ -1.63
CUX2O14529 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CUX2O14529 AL606537.1-201ENST00000607258 2011 ntBASIC4.87□□□□□ -1.63
CUX2O14529 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
CUX2O14529 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CUX2O14529 TTC39DP-201ENST00000416781 1688 ntBASIC4.87□□□□□ -1.63
CUX2O14529 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.87□□□□□ -1.63
CUX2O14529 RPL21P132-201ENST00000331267 462 ntBASIC4.87□□□□□ -1.63
CUX2O14529 RNU4-7P-201ENST00000364758 141 ntBASIC4.87□□□□□ -1.63
CUX2O14529 RNU6-14P-201ENST00000384630 106 ntBASIC4.87□□□□□ -1.63
CUX2O14529 Y_RNA.595-201ENST00000410403 105 ntBASIC4.87□□□□□ -1.63
CUX2O14529 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.87□□□□□ -1.63
CUX2O14529 SNRPGP5-201ENST00000456003 220 ntBASIC4.87□□□□□ -1.63
CUX2O14529 MTND3P6-201ENST00000485242 339 ntBASIC4.87□□□□□ -1.63
CUX2O14529 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.87□□□□□ -1.63
CUX2O14529 RNU6-1053P-201ENST00000515930 101 ntBASIC4.87□□□□□ -1.63
CUX2O14529 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.87□□□□□ -1.63
CUX2O14529 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.87□□□□□ -1.63
CUX2O14529 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.87□□□□□ -1.63
CUX2O14529 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.87□□□□□ -1.63
CUX2O14529 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CUX2O14529 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.86□□□□□ -1.63
CUX2O14529 LINC01355-201ENST00000566551 5444 ntBASIC4.86□□□□□ -1.63
CUX2O14529 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CUX2O14529 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CUX2O14529 SNORD65-201ENST00000391079 73 ntBASIC4.86□□□□□ -1.63
CUX2O14529 RPL5P19-201ENST00000404228 893 ntBASIC4.86□□□□□ -1.63
CUX2O14529 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.86□□□□□ -1.63
CUX2O14529 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.86□□□□□ -1.63
CUX2O14529 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.86□□□□□ -1.63
CUX2O14529 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.86□□□□□ -1.63
CUX2O14529 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.86□□□□□ -1.63
CUX2O14529 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CUX2O14529 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.86□□□□□ -1.63
CUX2O14529 AC022387.2-201ENST00000604050 448 ntBASIC4.86□□□□□ -1.63
CUX2O14529 AC019131.2-201ENST00000609071 870 ntBASIC4.86□□□□□ -1.63
CUX2O14529 RMST_5.1-201ENST00000618704 126 ntBASIC4.86□□□□□ -1.63
CUX2O14529 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CUX2O14529 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CUX2O14529 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.86□□□□□ -1.63
CUX2O14529 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.85□□□□□ -1.63
CUX2O14529 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CUX2O14529 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.85□□□□□ -1.63
CUX2O14529 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CUX2O14529 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
CUX2O14529 RN7SKP247-201ENST00000411094 308 ntBASIC4.85□□□□□ -1.63
CUX2O14529 AL137014.1-201ENST00000420490 1226 ntBASIC4.85□□□□□ -1.63
CUX2O14529 AL592045.1-201ENST00000429867 352 ntBASIC4.85□□□□□ -1.63
CUX2O14529 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.85□□□□□ -1.63
CUX2O14529 AC069277.2-201ENST00000454211 432 ntBASIC4.85□□□□□ -1.63
CUX2O14529 AC108078.3-201ENST00000502633 489 ntBASIC4.85□□□□□ -1.63
CUX2O14529 HAUS1P1-201ENST00000505275 832 ntBASIC4.85□□□□□ -1.63
CUX2O14529 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.85□□□□□ -1.63
CUX2O14529 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
CUX2O14529 AC093831.2-201ENST00000624393 3427 ntBASIC4.85□□□□□ -1.63
CUX2O14529 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CUX2O14529 AL592494.2-201ENST00000425455 1548 ntBASIC4.84□□□□□ -1.63
CUX2O14529 RNU6-1251P-201ENST00000364502 107 ntBASIC4.84□□□□□ -1.63
CUX2O14529 Y_RNA.540-201ENST00000384638 111 ntBASIC4.84□□□□□ -1.63
CUX2O14529 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.84□□□□□ -1.63
CUX2O14529 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.84□□□□□ -1.63
CUX2O14529 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.84□□□□□ -1.63
CUX2O14529 AC009063.1-201ENST00000563342 702 ntBASIC4.84□□□□□ -1.63
CUX2O14529 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.84□□□□□ -1.63
CUX2O14529 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.84□□□□□ -1.63
CUX2O14529 BMS1P7-201ENST00000602440 1052 ntBASIC4.84□□□□□ -1.63
CUX2O14529 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.83□□□□□ -1.64
CUX2O14529 RNU6-1159P-201ENST00000362933 107 ntBASIC4.83□□□□□ -1.64
CUX2O14529 AC013470.3-201ENST00000420252 1194 ntBASIC4.83□□□□□ -1.64
CUX2O14529 SETP10-201ENST00000424368 814 ntBASIC4.83□□□□□ -1.64
CUX2O14529 OR2AS1P-201ENST00000427827 319 ntBASIC4.83□□□□□ -1.64
CUX2O14529 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.83□□□□□ -1.64
CUX2O14529 OR2B8P-201ENST00000432841 938 ntBASIC4.83□□□□□ -1.64
CUX2O14529 Z85994.2-201ENST00000434327 452 ntBASIC4.83□□□□□ -1.64
CUX2O14529 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.83□□□□□ -1.64
CUX2O14529 HSPE1P22-201ENST00000456856 327 ntBASIC4.83□□□□□ -1.64
CUX2O14529 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.83□□□□□ -1.64
CUX2O14529 AP001025.2-201ENST00000490908 477 ntBASIC4.83□□□□□ -1.64
CUX2O14529 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.83□□□□□ -1.64
CUX2O14529 RPL7P20-201ENST00000520308 745 ntBASIC4.83□□□□□ -1.64
CUX2O14529 OR4V1P-201ENST00000525394 1140 ntBASIC4.83□□□□□ -1.64
CUX2O14529 UBTFL10-201ENST00000528532 562 ntBASIC4.83□□□□□ -1.64
CUX2O14529 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.83□□□□□ -1.64
CUX2O14529 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.83□□□□□ -1.64
CUX2O14529 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CUX2O14529 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CUX2O14529 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CUX2O14529 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
CUX2O14529 RPL31P12-201ENST00000422587 358 ntBASIC4.82□□□□□ -1.64
CUX2O14529 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.82□□□□□ -1.64
CUX2O14529 AL353705.4-201ENST00000449661 238 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms