Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 U6.101-201ENST00000637707 76 ntBASIC3.49□□□□□ -1.85
TRBV4-1A0A0J9YWV2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MTCO1P14-201ENST00000441695 1559 ntBASIC3.49□□□□□ -1.85
TRBV4-1A0A0J9YWV2 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
TRBV4-1A0A0J9YWV2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TRBV4-1A0A0J9YWV2 ZNF734P-201ENST00000419494 1534 ntBASIC3.49□□□□□ -1.85
TRBV4-1A0A0J9YWV2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRBV4-1A0A0J9YWV2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.49□□□□□ -1.85
TRBV4-1A0A0J9YWV2 FAM91A3P-201ENST00000456826 2544 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL079343.1-201ENST00000572358 1771 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 SGO1P2-201ENST00000429458 1589 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 U3.15-201ENST00000365398 212 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RNU6-356P-201ENST00000384140 107 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 OR6C69P-201ENST00000394268 893 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL391417.1-201ENST00000404100 426 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RHEBP3-201ENST00000411920 351 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RAP1BP1-201ENST00000412709 553 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MTCYBP38-201ENST00000417160 1123 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CYP4F29P-201ENST00000420685 446 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC005517.2-201ENST00000424673 553 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL365396.1-201ENST00000430854 671 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL606662.1-201ENST00000445763 553 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL590399.6-201ENST00000446396 307 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 NUTF2P3-201ENST00000448540 384 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MTND2P19-201ENST00000449129 1012 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC104978.1-201ENST00000449387 391 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPL5P32-201ENST00000454085 879 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RPS23P7-201ENST00000466210 444 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC147055.4-201ENST00000504399 745 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RNU4-60P-201ENST00000517239 135 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 IGKV2D-36-201ENST00000518643 226 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC008489.1-201ENST00000524271 483 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 DEFB131D-201ENST00000526803 184 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC009643.1-201ENST00000532030 391 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MIR4330-201ENST00000579077 105 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MIR4999-201ENST00000585029 91 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 BNIP3P24-201ENST00000593398 557 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC008751.2-201ENST00000597885 980 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC021171.1-201ENST00000603137 706 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL009028.1-201ENST00000604895 802 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 RNA5SP108-201ENST00000605921 117 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC006270.3-201ENST00000605967 1036 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC090116.1-201ENST00000615679 446 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 MTCO1P23-201ENST00000415223 1526 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AC073073.2-201ENST00000609827 2578 ntBASIC3.48□□□□□ -1.85
TRBV4-1A0A0J9YWV2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRBV4-1A0A0J9YWV2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.47□□□□□ -1.85
TRBV4-1A0A0J9YWV2 GDI2P1-201ENST00000429312 1336 ntBASIC3.47□□□□□ -1.85
TRBV4-1A0A0J9YWV2 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.47□□□□□ -1.85
TRBV4-1A0A0J9YWV2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRBV4-1A0A0J9YWV2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
TRBV4-1A0A0J9YWV2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TRBV4-1A0A0J9YWV2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRBV4-1A0A0J9YWV2 HSPA8P1-201ENST00000425843 1833 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms