Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC093801.2-201ENST00000503966 1050 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 RNU6-416P-201ENST00000516265 103 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 DNAJC19P3-201ENST00000594491 331 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC113194.1-201ENST00000606037 500 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC018754.1-201ENST00000607486 925 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 U3.45-201ENST00000607547 219 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC006133.1-201ENST00000617106 264 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AL138960.2-201ENST00000625145 535 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AL356118.1-201ENST00000635272 1078 ntBASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRAPPC4Q9Y296 AC017071.1-201ENST00000564407 2204 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 RPL7P26-201ENST00000333817 754 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 U6.112-201ENST00000384129 70 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 RNU6-1257P-201ENST00000384625 110 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 RNU6-1151P-201ENST00000384684 107 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC006960.1-201ENST00000419980 153 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AL009174.1-201ENST00000426577 416 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 OR2AS1P-201ENST00000427827 319 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 PRDX3P4-201ENST00000470828 747 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC093663.1-201ENST00000497190 394 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC026414.1-201ENST00000504046 698 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 FCF1P8-201ENST00000510322 597 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 RN7SKP96-201ENST00000516948 297 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC107934.2-201ENST00000518653 310 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 HMGB1P1-201ENST00000522557 636 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AF279873.1-201ENST00000523393 313 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AP003102.1-201ENST00000525638 661 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 OR8I1P-201ENST00000529291 931 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC074029.1-201ENST00000552531 1044 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC104072.1-201ENST00000568817 668 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC126365.2-201ENST00000580630 379 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC006116.7-201ENST00000590141 756 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC091488.1-201ENST00000604239 660 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC013468.1-201ENST00000608680 598 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AL359535.1-201ENST00000612100 1087 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC022079.2-201ENST00000619739 566 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC007275.1-201ENST00000621243 671 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AL138955.1-201ENST00000622881 1040 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AL109659.3-201ENST00000624985 950 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AC106858.1-201ENST00000637497 429 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 AL392088.2-201ENST00000637607 285 ntBASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.09□□□□□ -1.91
TRAPPC4Q9Y296 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
TRAPPC4Q9Y296 MTND4P8-201ENST00000514997 1362 ntBASIC3.09□□□□□ -1.92
TRAPPC4Q9Y296 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TRAPPC4Q9Y296 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
TRAPPC4Q9Y296 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 RNU5B-4P-201ENST00000363508 111 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 DYNLT3P1-201ENST00000378574 347 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 RPS7P15-201ENST00000415804 584 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms