Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 RPL23AP4-201ENST00000427757 463 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 HSFY6P-201ENST00000445573 403 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 YRDCP3-201ENST00000456507 480 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 RPL23AP11-201ENST00000475260 469 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 AC002456.2-201ENST00000509356 380 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 Y_RNA.661-201ENST00000516003 99 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 Y_RNA.721-201ENST00000517207 102 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 IGLV3-24-201ENST00000517477 197 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 AC107934.1-201ENST00000522215 217 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 AC090502.2-201ENST00000549267 280 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 HSPE1P2-201ENST00000554777 306 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 AC110743.1-201ENST00000584870 478 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM11Q96F44 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM11Q96F44 AC009779.8-202ENST00000607990 932 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 AL096712.1-201ENST00000614561 159 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 RN7SL544P-201ENST00000617232 284 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 RN7SL763P-201ENST00000620922 284 ntBASIC5.94□□□□□ -1.46
TRIM11Q96F44 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM11Q96F44 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM11Q96F44 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM11Q96F44 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM11Q96F44 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM11Q96F44 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC025125.1-201ENST00000624743 1922 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM11Q96F44 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM11Q96F44 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM11Q96F44 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM11Q96F44 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM11Q96F44 Y_RNA.288-201ENST00000364854 92 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 RN7SKP187-201ENST00000365536 330 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 RNU6-657P-201ENST00000383904 107 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 Y_RNA.396-201ENST00000383949 103 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 Y_RNA.515-201ENST00000384535 112 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 HMGB3P7-201ENST00000400214 611 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 AL009179.1-201ENST00000406085 265 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 RPS3AP2-201ENST00000407190 754 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 Y_RNA.646-201ENST00000410980 101 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 AL133482.1-201ENST00000415988 498 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 BX323845.3-201ENST00000428215 527 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC073465.2-201ENST00000440938 498 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 RPS7P5-201ENST00000441482 581 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC004980.3-201ENST00000447046 365 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 RPS27P27-201ENST00000498779 255 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 GZMAP1-201ENST00000503054 631 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 SNORD27.1-201ENST00000516319 72 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 RNA5SP454-201ENST00000517231 127 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 MYL12AP1-201ENST00000518490 515 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM11Q96F44 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC018442.3-201ENST00000523025 183 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 HMGB1P42-201ENST00000532126 553 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 OR8R1P-201ENST00000543943 764 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC092121.1-201ENST00000569452 202 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 MIR7853-201ENST00000584820 132 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC104695.3-201ENST00000604052 296 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC074140.1-201ENST00000621617 208 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM11Q96F44 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM11Q96F44 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 AC006206.1-201ENST00000544842 3387 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM11Q96F44 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
TRIM11Q96F44 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 SOCS5P3-201ENST00000425115 1576 ntBASIC5.93□□□□□ -1.46
TRIM11Q96F44 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM11Q96F44 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms