Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
DDX1Q92499 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
DDX1Q92499 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
DDX1Q92499 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
DDX1Q92499 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.34□□□□□ -1.56
DDX1Q92499 AC006378.2-201ENST00000623178 2476 ntBASIC5.34□□□□□ -1.56
DDX1Q92499 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
DDX1Q92499 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
DDX1Q92499 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.34□□□□□ -1.56
DDX1Q92499 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
DDX1Q92499 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
DDX1Q92499 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.33□□□□□ -1.56
DDX1Q92499 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
DDX1Q92499 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
DDX1Q92499 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
DDX1Q92499 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
DDX1Q92499 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
DDX1Q92499 OR11H4-201ENST00000315409 1082 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 RN7SKP227-201ENST00000364445 330 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 Y_RNA.356-201ENST00000365475 113 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 Y_RNA.548-201ENST00000384656 105 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
DDX1Q92499 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.33□□□□□ -1.56
DDX1Q92499 AL356776.1-201ENST00000406574 447 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 USP9YP13-201ENST00000417797 480 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 AC013429.2-201ENST00000418798 781 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 AC109583.1-201ENST00000432156 268 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.33□□□□□ -1.56
DDX1Q92499 snoU109.1-201ENST00000459339 135 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 AC087312.1-201ENST00000471411 480 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 AL136126.1-201ENST00000473603 402 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.33□□□□□ -1.56
DDX1Q92499 HMGN1P13-201ENST00000505795 138 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.33□□□□□ -1.56
DDX1Q92499 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.33□□□□□ -1.56
DDX1Q92499 AC018710.1-201ENST00000506509 158 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.33□□□□□ -1.56
DDX1Q92499 LRRC34P2-201ENST00000514850 553 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 RNA5SP43-201ENST00000516559 110 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 PAICSP4-201ENST00000517543 1253 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.33□□□□□ -1.56
DDX1Q92499 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.33□□□□□ -1.56
DDX1Q92499 COX6CP8-201ENST00000522620 226 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.33□□□□□ -1.56
DDX1Q92499 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.33□□□□□ -1.56
DDX1Q92499 OR5AN2P-201ENST00000534535 896 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 AC092470.1-201ENST00000546187 132 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.33□□□□□ -1.56
DDX1Q92499 AC090312.1-201ENST00000580637 348 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 AC022916.3-201ENST00000592961 742 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.33□□□□□ -1.56
DDX1Q92499 AP001429.1-201ENST00000602568 530 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 YWHAQP7-201ENST00000603536 658 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.33□□□□□ -1.56
DDX1Q92499 MTND5P42-201ENST00000637720 498 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 CRYM-AS1-204ENST00000637983 556 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
DDX1Q92499 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.33□□□□□ -1.56
DDX1Q92499 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
DDX1Q92499 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
DDX1Q92499 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
DDX1Q92499 AL731532.2-201ENST00000623542 1953 ntBASIC5.33□□□□□ -1.56
DDX1Q92499 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DDX1Q92499 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DDX1Q92499 AL022311.1-201ENST00000623726 19416 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DDX1Q92499 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
DDX1Q92499 AC021242.1-201ENST00000507315 2035 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DDX1Q92499 RNU1-130P-201ENST00000363930 160 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
DDX1Q92499 Y_RNA.460-201ENST00000384255 102 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DDX1Q92499 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX1Q92499 AL356583.2-201ENST00000426536 280 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 NPM1P34-201ENST00000428821 893 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 RPS3AP54-201ENST00000435535 734 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX1Q92499 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX1Q92499 AL513533.1-201ENST00000453728 415 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 snoU13.20-201ENST00000459180 104 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 AC114967.1-201ENST00000504890 259 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX1Q92499 IGKV1-32-201ENST00000519290 311 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX1Q92499 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX1Q92499 AC005868.1-201ENST00000536421 331 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX1Q92499 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX1Q92499 ARL2BPP2-201ENST00000550907 489 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DDX1Q92499 MIR4795-201ENST00000584182 89 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX1Q92499 TPMTP1-201ENST00000592307 737 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 AC007566.2-201ENST00000603642 413 ntBASIC5.32□□□□□ -1.56
DDX1Q92499 AC104687.2-201ENST00000604442 342 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms