Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 U8.2-201ENST00000363156 134 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 MIR7-1-201ENST00000384871 110 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 MIR9-1-201ENST00000385198 89 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AL356806.1-201ENST00000422524 916 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 SRIP1-201ENST00000489235 288 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AC008837.1-201ENST00000511513 412 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 H3F3AP1-201ENST00000559984 334 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AC234778.2-201ENST00000566241 354 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 MIR5047-201ENST00000579212 100 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 AL133370.2-201ENST00000619934 439 ntBASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.91□□□□□ -1.94
SHROOM3Q8TF72 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SHROOM3Q8TF72 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC2.9□□□□□ -1.94
SHROOM3Q8TF72 AL133412.1-201ENST00000380194 2992 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 RNU6-851P-201ENST00000384565 107 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 NPM1P10-201ENST00000398310 865 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 RNU2-52P-201ENST00000410680 190 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 MTATP6P11-201ENST00000428071 670 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AL662791.1-201ENST00000441992 928 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AC068305.1-201ENST00000497406 726 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 KCTD9P5-201ENST00000504141 1170 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AC005351.1-201ENST00000511152 786 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AP002812.4-201ENST00000532139 286 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AC009268.1-201ENST00000561352 1203 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AC009977.1-201ENST00000586015 570 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AC083760.1-201ENST00000589621 670 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 VN1R79P-201ENST00000593540 513 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AC006254.3-201ENST00000603353 884 ntBASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHROOM3Q8TF72 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AL589826.1-201ENST00000340697 249 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AL355379.1-201ENST00000405542 640 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AC004987.3-201ENST00000413879 771 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 FAM204CP-201ENST00000424489 642 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 RWDD4P2-201ENST00000426392 563 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 NPM1P24-201ENST00000428039 894 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 RWDD4P1-201ENST00000488019 565 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AC108157.1-201ENST00000510511 539 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 OR5AK3P-201ENST00000527486 1297 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AP002770.2-201ENST00000543613 532 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AC055876.1-202ENST00000567053 138 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 DEFB122-202ENST00000569013 197 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AL020991.1-201ENST00000612314 373 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 MIR6715B-201ENST00000637172 77 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 ASNSP1-201ENST00000518311 1939 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 MIR137-201ENST00000385223 102 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AC019070.1-201ENST00000415008 1024 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AC114878.1-201ENST00000441166 358 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 HMGN2P7-201ENST00000456186 273 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 MTND2P31-201ENST00000512602 616 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AC074029.2-201ENST00000551045 634 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AC004832.5-201ENST00000608677 401 ntBASIC2.89□□□□□ -1.95
SHROOM3Q8TF72 AC090115.4-201ENST00000609970 188 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms