Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 RPL37P6-202ENST00000464216 403 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AL132838.2-201ENST00000492041 314 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC092045.1-201ENST00000495716 1231 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC108941.1-201ENST00000502853 530 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 RN7SKP234-201ENST00000517173 224 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC104986.1-201ENST00000517978 436 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC008802.1-201ENST00000519121 791 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 MTCO1P49-201ENST00000523429 802 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 HSPA8P13-201ENST00000523715 472 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC006064.5-201ENST00000541782 248 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 OR8R1P-201ENST00000543943 764 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AL133457.1-201ENST00000564251 987 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 LARP7P2-201ENST00000575306 125 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 MIR3915-201ENST00000578518 97 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC009090.3-201ENST00000616553 565 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC007494.3-201ENST00000624660 743 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 AC018529.3-201ENST00000624212 2254 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.89□□□□□ -1.79
BEST3Q8N1M1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
BEST3Q8N1M1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 Y_RNA.302-201ENST00000364997 102 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 RNA5SP283-201ENST00000365604 119 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 SNORA37-201ENST00000384504 129 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 SNORD66.1-201ENST00000391230 76 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 RNU6-920P-201ENST00000410926 92 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 ZYG11AP1-201ENST00000430329 837 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 RPS27AP8-201ENST00000452665 445 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AC092754.2-201ENST00000463506 460 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AL136126.1-201ENST00000473603 402 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 MTCYBP43-201ENST00000513621 740 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AC106785.1-201ENST00000565935 262 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AC012435.1-202ENST00000568772 240 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 MIR5186-201ENST00000577504 120 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 YWHAQP7-201ENST00000603536 658 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AC115621.1-201ENST00000604653 858 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AL009028.1-201ENST00000604895 802 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 RNU4-89P-201ENST00000607443 133 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AC080013.4-201ENST00000607624 649 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AC000123.2-201ENST00000623124 461 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 CYP3A51P-201ENST00000633513 256 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
BEST3Q8N1M1 ELL2P3-201ENST00000457883 1602 ntBASIC3.88□□□□□ -1.79
BEST3Q8N1M1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AP002907.1-201ENST00000606361 1430 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms